Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC16.75■□□□□ 0.27
PMS1P54277 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PMS1P54277 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PMS1P54277 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC16.75■□□□□ 0.27
PMS1P54277 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PMS1P54277 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PMS1P54277 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PMS1P54277 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PMS1P54277 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC16.75■□□□□ 0.27
PMS1P54277 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PMS1P54277 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC16.75■□□□□ 0.27
PMS1P54277 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PMS1P54277 MX1-218ENST00000619682 1980 ntTSL 5 BASIC16.75■□□□□ 0.27
PMS1P54277 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PMS1P54277 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PMS1P54277 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PMS1P54277 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC16.74■□□□□ 0.27
PMS1P54277 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PMS1P54277 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC16.74■□□□□ 0.27
PMS1P54277 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PMS1P54277 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PMS1P54277 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
PMS1P54277 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC16.74■□□□□ 0.27
PMS1P54277 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.74■□□□□ 0.27
PMS1P54277 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PMS1P54277 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PMS1P54277 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PMS1P54277 FLJ16779-201ENST00000612722 7638 ntBASIC16.74■□□□□ 0.27
PMS1P54277 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PMS1P54277 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PMS1P54277 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
PMS1P54277 METTL26-204ENST00000397665 558 ntTSL 2 BASIC16.74■□□□□ 0.27
PMS1P54277 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
PMS1P54277 SPTLC1P1-201ENST00000447199 261 ntBASIC16.74■□□□□ 0.27
PMS1P54277 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC16.74■□□□□ 0.27
PMS1P54277 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
PMS1P54277 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
PMS1P54277 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PMS1P54277 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC16.74■□□□□ 0.27
PMS1P54277 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
PMS1P54277 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
PMS1P54277 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PMS1P54277 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PMS1P54277 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PMS1P54277 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
PMS1P54277 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
PMS1P54277 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC16.73■□□□□ 0.27
PMS1P54277 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PMS1P54277 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PMS1P54277 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PMS1P54277 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
PMS1P54277 LINC01230-201ENST00000625222 3017 ntBASIC16.73■□□□□ 0.27
PMS1P54277 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PMS1P54277 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PMS1P54277 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PMS1P54277 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
PMS1P54277 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PMS1P54277 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PMS1P54277 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PMS1P54277 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PMS1P54277 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
PMS1P54277 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PMS1P54277 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
PMS1P54277 MIR661-201ENST00000384842 89 ntBASIC16.73■□□□□ 0.27
PMS1P54277 MPV17-208ENST00000405076 603 ntTSL 5 BASIC16.73■□□□□ 0.27
PMS1P54277 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC16.73■□□□□ 0.27
PMS1P54277 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC16.73■□□□□ 0.27
PMS1P54277 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC16.73■□□□□ 0.27
PMS1P54277 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PMS1P54277 FADS2-205ENST00000517839 469 ntTSL 3 BASIC16.73■□□□□ 0.27
PMS1P54277 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC16.73■□□□□ 0.27
PMS1P54277 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC16.73■□□□□ 0.27
PMS1P54277 SPDYE22P-201ENST00000582158 798 ntBASIC16.73■□□□□ 0.27
PMS1P54277 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.73■□□□□ 0.27
PMS1P54277 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PMS1P54277 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
PMS1P54277 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PMS1P54277 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PMS1P54277 SLC7A15P-201ENST00000424028 1363 ntBASIC16.73■□□□□ 0.27
PMS1P54277 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
PMS1P54277 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PMS1P54277 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
PMS1P54277 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PMS1P54277 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PMS1P54277 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PMS1P54277 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PMS1P54277 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
PMS1P54277 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
PMS1P54277 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PMS1P54277 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
PMS1P54277 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PMS1P54277 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC16.72■□□□□ 0.27
PMS1P54277 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PMS1P54277 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PMS1P54277 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
PMS1P54277 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
PMS1P54277 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC16.72■□□□□ 0.27
PMS1P54277 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PMS1P54277 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PMS1P54277 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms