Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC17.15■□□□□ 0.34
USP11P51784 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
USP11P51784 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
USP11P51784 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC17.15■□□□□ 0.34
USP11P51784 AC023090.2-201ENST00000625182 2110 ntBASIC17.15■□□□□ 0.34
USP11P51784 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
USP11P51784 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
USP11P51784 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
USP11P51784 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
USP11P51784 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC17.15■□□□□ 0.34
USP11P51784 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
USP11P51784 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
USP11P51784 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
USP11P51784 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
USP11P51784 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
USP11P51784 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC17.15■□□□□ 0.34
USP11P51784 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
USP11P51784 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
USP11P51784 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
USP11P51784 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC17.14■□□□□ 0.34
USP11P51784 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
USP11P51784 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
USP11P51784 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
USP11P51784 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP11P51784 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP11P51784 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP11P51784 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
USP11P51784 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC17.14■□□□□ 0.33
USP11P51784 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
USP11P51784 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP11P51784 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
USP11P51784 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP11P51784 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP11P51784 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP11P51784 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP11P51784 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP11P51784 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP11P51784 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP11P51784 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP11P51784 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC17.14■□□□□ 0.33
USP11P51784 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC17.14■□□□□ 0.33
USP11P51784 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
USP11P51784 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC17.14■□□□□ 0.33
USP11P51784 ATP5G2P4-201ENST00000442175 420 ntBASIC17.14■□□□□ 0.33
USP11P51784 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC17.14■□□□□ 0.33
USP11P51784 AC119751.2-201ENST00000504529 210 ntBASIC17.14■□□□□ 0.33
USP11P51784 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC17.14■□□□□ 0.33
USP11P51784 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
USP11P51784 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC17.14■□□□□ 0.33
USP11P51784 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC17.14■□□□□ 0.33
USP11P51784 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
USP11P51784 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP11P51784 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP11P51784 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP11P51784 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC17.14■□□□□ 0.33
USP11P51784 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP11P51784 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
USP11P51784 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC17.14■□□□□ 0.33
USP11P51784 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
USP11P51784 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP11P51784 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP11P51784 LINC00528-201ENST00000600723 2160 ntBASIC17.13■□□□□ 0.33
USP11P51784 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
USP11P51784 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP11P51784 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC17.13■□□□□ 0.33
USP11P51784 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
USP11P51784 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
USP11P51784 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
USP11P51784 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC17.13■□□□□ 0.33
USP11P51784 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
USP11P51784 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
USP11P51784 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC17.13■□□□□ 0.33
USP11P51784 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP11P51784 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP11P51784 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP11P51784 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
USP11P51784 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
USP11P51784 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC17.13■□□□□ 0.33
USP11P51784 AHRR-211ENST00000515206 462 ntTSL 5 BASIC17.13■□□□□ 0.33
USP11P51784 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
USP11P51784 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC17.13■□□□□ 0.33
USP11P51784 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC17.13■□□□□ 0.33
USP11P51784 COX11-210ENST00000639671 696 ntBASIC17.13■□□□□ 0.33
USP11P51784 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC17.13■□□□□ 0.33
USP11P51784 GSN-215ENST00000545652 2428 ntTSL 2 BASIC17.13■□□□□ 0.33
USP11P51784 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP11P51784 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC17.13■□□□□ 0.33
USP11P51784 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP11P51784 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP11P51784 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP11P51784 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
USP11P51784 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
USP11P51784 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC17.13■□□□□ 0.33
USP11P51784 CLUHP2-201ENST00000426660 1303 ntBASIC17.13■□□□□ 0.33
USP11P51784 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP11P51784 POR-201ENST00000394893 2532 ntTSL 5 BASIC17.13■□□□□ 0.33
USP11P51784 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP11P51784 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC17.13■□□□□ 0.33
USP11P51784 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
USP11P51784 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms