Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
HOXA13P31271 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HOXA13P31271 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
HOXA13P31271 C2orf69P2-201ENST00000562032 1123 ntBASIC17.27■□□□□ 0.36
HOXA13P31271 AC138466.3-201ENST00000619983 221 ntBASIC17.27■□□□□ 0.36
HOXA13P31271 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC17.27■□□□□ 0.36
HOXA13P31271 AL603764.1-201ENST00000636452 321 ntBASIC17.27■□□□□ 0.36
HOXA13P31271 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HOXA13P31271 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HOXA13P31271 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC17.27■□□□□ 0.36
HOXA13P31271 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
HOXA13P31271 ANKRD30BP2-201ENST00000435744 1610 ntBASIC17.27■□□□□ 0.36
HOXA13P31271 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HOXA13P31271 AL109954.1-202ENST00000564051 2148 ntBASIC17.27■□□□□ 0.35
HOXA13P31271 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HOXA13P31271 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
HOXA13P31271 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
HOXA13P31271 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
HOXA13P31271 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HOXA13P31271 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HOXA13P31271 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
HOXA13P31271 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
HOXA13P31271 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HOXA13P31271 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HOXA13P31271 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HOXA13P31271 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
HOXA13P31271 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
HOXA13P31271 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HOXA13P31271 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC17.26■□□□□ 0.35
HOXA13P31271 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HOXA13P31271 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
HOXA13P31271 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
HOXA13P31271 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HOXA13P31271 AC068587.6-202ENST00000641839 5619 ntBASIC17.26■□□□□ 0.35
HOXA13P31271 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HOXA13P31271 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
HOXA13P31271 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC17.26■□□□□ 0.35
HOXA13P31271 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC17.26■□□□□ 0.35
HOXA13P31271 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
HOXA13P31271 HOMER2P2-201ENST00000451621 847 ntBASIC17.26■□□□□ 0.35
HOXA13P31271 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HOXA13P31271 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC17.26■□□□□ 0.35
HOXA13P31271 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC17.26■□□□□ 0.35
HOXA13P31271 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HOXA13P31271 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
HOXA13P31271 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC17.26■□□□□ 0.35
HOXA13P31271 AC106820.3-201ENST00000561653 397 ntBASIC17.26■□□□□ 0.35
HOXA13P31271 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC17.26■□□□□ 0.35
HOXA13P31271 AC073413.1-201ENST00000603927 732 ntBASIC17.26■□□□□ 0.35
HOXA13P31271 MIR6869-201ENST00000619434 62 ntBASIC17.26■□□□□ 0.35
HOXA13P31271 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HOXA13P31271 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HOXA13P31271 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC17.26■□□□□ 0.35
HOXA13P31271 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HOXA13P31271 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HOXA13P31271 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HOXA13P31271 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HOXA13P31271 FES-204ENST00000414248 2327 ntTSL 2 BASIC17.26■□□□□ 0.35
HOXA13P31271 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HOXA13P31271 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HOXA13P31271 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HOXA13P31271 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.26■□□□□ 0.35
HOXA13P31271 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.26■□□□□ 0.35
HOXA13P31271 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
HOXA13P31271 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HOXA13P31271 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HOXA13P31271 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HOXA13P31271 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
HOXA13P31271 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HOXA13P31271 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
HOXA13P31271 AC011270.2-201ENST00000624293 2550 ntBASIC17.26■□□□□ 0.35
HOXA13P31271 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
HOXA13P31271 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
HOXA13P31271 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HOXA13P31271 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
HOXA13P31271 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
HOXA13P31271 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HOXA13P31271 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC17.25■□□□□ 0.35
HOXA13P31271 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
HOXA13P31271 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC17.25■□□□□ 0.35
HOXA13P31271 KRT8P4-201ENST00000509735 1454 ntBASIC17.25■□□□□ 0.35
HOXA13P31271 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HOXA13P31271 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HOXA13P31271 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
HOXA13P31271 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HOXA13P31271 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC17.25■□□□□ 0.35
HOXA13P31271 INE2-201ENST00000630399 1874 ntBASIC17.25■□□□□ 0.35
HOXA13P31271 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HOXA13P31271 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC17.25■□□□□ 0.35
HOXA13P31271 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC17.25■□□□□ 0.35
HOXA13P31271 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
HOXA13P31271 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HOXA13P31271 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC17.25■□□□□ 0.35
HOXA13P31271 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
HOXA13P31271 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HOXA13P31271 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HOXA13P31271 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HOXA13P31271 Z93015.1-201ENST00000451718 390 ntBASIC17.25■□□□□ 0.35
HOXA13P31271 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC17.25■□□□□ 0.35
HOXA13P31271 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms