Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
RAB4AP20338 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
RAB4AP20338 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
RAB4AP20338 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC11.77□□□□□ -0.53
RAB4AP20338 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
RAB4AP20338 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
RAB4AP20338 HCG4-201ENST00000418983 998 ntBASIC11.77□□□□□ -0.53
RAB4AP20338 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC11.77□□□□□ -0.53
RAB4AP20338 FAM8A3P-201ENST00000427218 844 ntBASIC11.77□□□□□ -0.53
RAB4AP20338 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
RAB4AP20338 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
RAB4AP20338 BX005266.1-201ENST00000473402 457 ntBASIC11.77□□□□□ -0.53
RAB4AP20338 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
RAB4AP20338 AC063952.2-201ENST00000498792 1227 ntBASIC11.77□□□□□ -0.53
RAB4AP20338 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC11.77□□□□□ -0.53
RAB4AP20338 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC11.77□□□□□ -0.53
RAB4AP20338 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
RAB4AP20338 BSG-214ENST00000614867 960 ntTSL 3 BASIC11.77□□□□□ -0.53
RAB4AP20338 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
RAB4AP20338 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
RAB4AP20338 SLC6A19-201ENST00000304460 5174 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
RAB4AP20338 POU5F2-201ENST00000606183 8418 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
RAB4AP20338 TMEM56-201ENST00000370203 6822 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
RAB4AP20338 TRPM5-203ENST00000533060 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
RAB4AP20338 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
RAB4AP20338 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC11.77□□□□□ -0.53
RAB4AP20338 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
RAB4AP20338 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC11.77□□□□□ -0.53
RAB4AP20338 GFRA1-204ENST00000439649 9216 ntAPPRIS P3 TSL 2 BASIC11.77□□□□□ -0.53
RAB4AP20338 KRT18P1-202ENST00000452408 1331 ntBASIC11.77□□□□□ -0.53
RAB4AP20338 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
RAB4AP20338 RAB3IP-212ENST00000550536 9646 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
RAB4AP20338 SLC3A1-205ENST00000409387 2334 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
RAB4AP20338 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
RAB4AP20338 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
RAB4AP20338 LRRC57-201ENST00000323443 7351 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
RAB4AP20338 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
RAB4AP20338 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
RAB4AP20338 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
RAB4AP20338 STARD8-203ENST00000374599 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
RAB4AP20338 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
RAB4AP20338 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
RAB4AP20338 RAP1GAP2-201ENST00000254695 6661 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
RAB4AP20338 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC11.77□□□□□ -0.53
RAB4AP20338 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
RAB4AP20338 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC11.77□□□□□ -0.53
RAB4AP20338 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
RAB4AP20338 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC11.76□□□□□ -0.53
RAB4AP20338 AL033529.1-201ENST00000480336 3447 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
RAB4AP20338 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC11.76□□□□□ -0.53
RAB4AP20338 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
RAB4AP20338 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
RAB4AP20338 KCNMA1-285ENST00000640605 3864 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
RAB4AP20338 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
RAB4AP20338 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
RAB4AP20338 PRKCE-201ENST00000306156 5650 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
RAB4AP20338 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC11.76□□□□□ -0.53
RAB4AP20338 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
RAB4AP20338 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC11.76□□□□□ -0.53
RAB4AP20338 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
RAB4AP20338 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
RAB4AP20338 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
RAB4AP20338 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
RAB4AP20338 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
RAB4AP20338 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
RAB4AP20338 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
RAB4AP20338 NME2-201ENST00000393183 568 ntTSL 2 BASIC11.76□□□□□ -0.53
RAB4AP20338 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC11.76□□□□□ -0.53
RAB4AP20338 IGHV3-47-201ENST00000425060 335 ntBASIC11.76□□□□□ -0.53
RAB4AP20338 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC11.76□□□□□ -0.53
RAB4AP20338 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC11.76□□□□□ -0.53
RAB4AP20338 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
RAB4AP20338 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
RAB4AP20338 SLC25A6P2-201ENST00000497974 877 ntBASIC11.76□□□□□ -0.53
RAB4AP20338 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC11.76□□□□□ -0.53
RAB4AP20338 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC11.76□□□□□ -0.53
RAB4AP20338 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
RAB4AP20338 AL160237.2-201ENST00000556165 472 ntBASIC11.76□□□□□ -0.53
RAB4AP20338 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC11.76□□□□□ -0.53
RAB4AP20338 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC11.76□□□□□ -0.53
RAB4AP20338 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC11.76□□□□□ -0.53
RAB4AP20338 LINC01023-201ENST00000606054 436 ntBASIC11.76□□□□□ -0.53
RAB4AP20338 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC11.76□□□□□ -0.53
RAB4AP20338 WT1-AS_2.1-201ENST00000613208 137 ntBASIC11.76□□□□□ -0.53
RAB4AP20338 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC11.76□□□□□ -0.53
RAB4AP20338 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
RAB4AP20338 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC11.76□□□□□ -0.53
RAB4AP20338 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC11.76□□□□□ -0.53
RAB4AP20338 AL022326.1-202ENST00000641533 845 ntBASIC11.76□□□□□ -0.53
RAB4AP20338 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
RAB4AP20338 PI4KAP1-204ENST00000612579 1703 ntBASIC11.76□□□□□ -0.53
RAB4AP20338 TIAM1-206ENST00000541036 7018 ntTSL 5 BASIC11.76□□□□□ -0.53
RAB4AP20338 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC11.76□□□□□ -0.53
RAB4AP20338 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
RAB4AP20338 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
RAB4AP20338 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC11.76□□□□□ -0.53
RAB4AP20338 HADH-202ENST00000403312 1752 ntTSL 5 BASIC11.76□□□□□ -0.53
RAB4AP20338 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
RAB4AP20338 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC11.76□□□□□ -0.53
RAB4AP20338 AC016734.2-201ENST00000624325 1377 ntBASIC11.76□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms