Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TNFRSF1BP20333 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
TNFRSF1BP20333 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TNFRSF1BP20333 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
TNFRSF1BP20333 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
TNFRSF1BP20333 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
TNFRSF1BP20333 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
TNFRSF1BP20333 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
TNFRSF1BP20333 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
TNFRSF1BP20333 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
TNFRSF1BP20333 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
TNFRSF1BP20333 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
TNFRSF1BP20333 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TNFRSF1BP20333 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TNFRSF1BP20333 AL157414.3-201ENST00000624276 1954 ntBASIC14.2□□□□□ -0.14
TNFRSF1BP20333 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC14.2□□□□□ -0.14
TNFRSF1BP20333 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TNFRSF1BP20333 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TNFRSF1BP20333 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.2□□□□□ -0.14
TNFRSF1BP20333 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TNFRSF1BP20333 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TNFRSF1BP20333 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.2□□□□□ -0.14
TNFRSF1BP20333 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.2□□□□□ -0.14
TNFRSF1BP20333 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.2□□□□□ -0.14
TNFRSF1BP20333 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
TNFRSF1BP20333 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.2□□□□□ -0.14
TNFRSF1BP20333 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.2□□□□□ -0.14
TNFRSF1BP20333 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.2□□□□□ -0.14
TNFRSF1BP20333 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
TNFRSF1BP20333 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TNFRSF1BP20333 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TNFRSF1BP20333 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TNFRSF1BP20333 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TNFRSF1BP20333 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TNFRSF1BP20333 AC104457.1-201ENST00000401024 814 ntBASIC14.2□□□□□ -0.14
TNFRSF1BP20333 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.2□□□□□ -0.14
TNFRSF1BP20333 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.2□□□□□ -0.14
TNFRSF1BP20333 KRT18P43-201ENST00000469825 1281 ntBASIC14.2□□□□□ -0.14
TNFRSF1BP20333 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.2□□□□□ -0.14
TNFRSF1BP20333 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC14.2□□□□□ -0.14
TNFRSF1BP20333 AC027612.4-201ENST00000605371 583 ntBASIC14.2□□□□□ -0.14
TNFRSF1BP20333 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.2□□□□□ -0.14
TNFRSF1BP20333 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.2□□□□□ -0.14
TNFRSF1BP20333 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TNFRSF1BP20333 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TNFRSF1BP20333 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.2□□□□□ -0.14
TNFRSF1BP20333 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.2□□□□□ -0.14
TNFRSF1BP20333 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
TNFRSF1BP20333 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
TNFRSF1BP20333 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.2□□□□□ -0.14
TNFRSF1BP20333 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.2□□□□□ -0.14
TNFRSF1BP20333 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TNFRSF1BP20333 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
TNFRSF1BP20333 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
TNFRSF1BP20333 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
TNFRSF1BP20333 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TNFRSF1BP20333 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TNFRSF1BP20333 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TNFRSF1BP20333 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TNFRSF1BP20333 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC14.2□□□□□ -0.14
TNFRSF1BP20333 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TNFRSF1BP20333 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TNFRSF1BP20333 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
TNFRSF1BP20333 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.19□□□□□ -0.14
TNFRSF1BP20333 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TNFRSF1BP20333 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
TNFRSF1BP20333 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.19□□□□□ -0.14
TNFRSF1BP20333 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TNFRSF1BP20333 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TNFRSF1BP20333 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
TNFRSF1BP20333 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.19□□□□□ -0.14
TNFRSF1BP20333 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.19□□□□□ -0.14
TNFRSF1BP20333 AC007787.1-201ENST00000588095 1583 ntBASIC14.19□□□□□ -0.14
TNFRSF1BP20333 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
TNFRSF1BP20333 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TNFRSF1BP20333 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC14.19□□□□□ -0.14
TNFRSF1BP20333 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TNFRSF1BP20333 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC14.19□□□□□ -0.14
TNFRSF1BP20333 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
TNFRSF1BP20333 AC211486.1-202ENST00000416371 468 ntBASIC14.19□□□□□ -0.14
TNFRSF1BP20333 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.19□□□□□ -0.14
TNFRSF1BP20333 BX842568.4-201ENST00000421222 227 ntBASIC14.19□□□□□ -0.14
TNFRSF1BP20333 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.19□□□□□ -0.14
TNFRSF1BP20333 COX10-202ENST00000429152 875 ntTSL 2 BASIC14.19□□□□□ -0.14
TNFRSF1BP20333 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.19□□□□□ -0.14
TNFRSF1BP20333 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC14.19□□□□□ -0.14
TNFRSF1BP20333 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
TNFRSF1BP20333 AC211476.1-201ENST00000503899 468 ntBASIC14.19□□□□□ -0.14
TNFRSF1BP20333 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.19□□□□□ -0.14
TNFRSF1BP20333 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
TNFRSF1BP20333 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
TNFRSF1BP20333 AC010336.2-201ENST00000564226 506 ntBASIC14.19□□□□□ -0.14
TNFRSF1BP20333 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC14.19□□□□□ -0.14
TNFRSF1BP20333 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
TNFRSF1BP20333 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TNFRSF1BP20333 TEX28P1-201ENST00000613479 1221 ntBASIC14.19□□□□□ -0.14
TNFRSF1BP20333 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC14.19□□□□□ -0.14
TNFRSF1BP20333 AL138828.2-201ENST00000615812 383 ntBASIC14.19□□□□□ -0.14
TNFRSF1BP20333 TEX28P2-201ENST00000617764 1221 ntBASIC14.19□□□□□ -0.14
TNFRSF1BP20333 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms