Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CCL4P13236 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.25□□□□□ -0.13
CCL4P13236 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CCL4P13236 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCL4P13236 AC012508.2-201ENST00000567613 1472 ntBASIC14.25□□□□□ -0.13
CCL4P13236 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCL4P13236 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCL4P13236 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CCL4P13236 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CCL4P13236 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CCL4P13236 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCL4P13236 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CCL4P13236 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CCL4P13236 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC14.25□□□□□ -0.13
CCL4P13236 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CCL4P13236 NUP210P1-202ENST00000504322 710 ntBASIC14.25□□□□□ -0.13
CCL4P13236 HNRNPA1P36-201ENST00000521313 955 ntBASIC14.25□□□□□ -0.13
CCL4P13236 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC14.25□□□□□ -0.13
CCL4P13236 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC14.25□□□□□ -0.13
CCL4P13236 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC14.25□□□□□ -0.13
CCL4P13236 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC14.25□□□□□ -0.13
CCL4P13236 DUX4L46-201ENST00000566845 751 ntBASIC14.25□□□□□ -0.13
CCL4P13236 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CCL4P13236 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.25□□□□□ -0.13
CCL4P13236 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC14.25□□□□□ -0.13
CCL4P13236 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC14.25□□□□□ -0.13
CCL4P13236 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC14.25□□□□□ -0.13
CCL4P13236 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCL4P13236 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCL4P13236 AL805961.1-203ENST00000641078 1258 ntBASIC14.25□□□□□ -0.13
CCL4P13236 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCL4P13236 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCL4P13236 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCL4P13236 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.25□□□□□ -0.13
CCL4P13236 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCL4P13236 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC14.25□□□□□ -0.13
CCL4P13236 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
CCL4P13236 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCL4P13236 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCL4P13236 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCL4P13236 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCL4P13236 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCL4P13236 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CCL4P13236 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCL4P13236 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CCL4P13236 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCL4P13236 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC14.24□□□□□ -0.13
CCL4P13236 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCL4P13236 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCL4P13236 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCL4P13236 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.24□□□□□ -0.13
CCL4P13236 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.24□□□□□ -0.13
CCL4P13236 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CCL4P13236 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCL4P13236 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.24□□□□□ -0.13
CCL4P13236 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.24□□□□□ -0.13
CCL4P13236 RN7SKP230-201ENST00000365642 335 ntBASIC14.24□□□□□ -0.13
CCL4P13236 AK6-201ENST00000380818 1183 ntTSL 2 BASIC14.24□□□□□ -0.13
CCL4P13236 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCL4P13236 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.24□□□□□ -0.13
CCL4P13236 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCL4P13236 RPL18P13-201ENST00000478088 569 ntBASIC14.24□□□□□ -0.13
CCL4P13236 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC14.24□□□□□ -0.13
CCL4P13236 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC14.24□□□□□ -0.13
CCL4P13236 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC14.24□□□□□ -0.13
CCL4P13236 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC14.24□□□□□ -0.13
CCL4P13236 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC14.24□□□□□ -0.13
CCL4P13236 MIR3907-201ENST00000579424 151 ntBASIC14.24□□□□□ -0.13
CCL4P13236 AL133499.1-201ENST00000596207 608 ntBASIC14.24□□□□□ -0.13
CCL4P13236 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC14.24□□□□□ -0.13
CCL4P13236 AC090164.2-201ENST00000611487 516 ntBASIC14.24□□□□□ -0.13
CCL4P13236 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC14.24□□□□□ -0.13
CCL4P13236 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCL4P13236 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCL4P13236 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCL4P13236 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CCL4P13236 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCL4P13236 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCL4P13236 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.24□□□□□ -0.13
CCL4P13236 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CCL4P13236 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
CCL4P13236 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCL4P13236 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.24□□□□□ -0.13
CCL4P13236 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CCL4P13236 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCL4P13236 WAC-202ENST00000347934 2839 ntTSL 5 BASIC14.23□□□□□ -0.13
CCL4P13236 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CCL4P13236 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CCL4P13236 AC099398.1-201ENST00000567919 2776 ntBASIC14.23□□□□□ -0.13
CCL4P13236 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCL4P13236 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
CCL4P13236 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCL4P13236 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CCL4P13236 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC14.23□□□□□ -0.13
CCL4P13236 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CCL4P13236 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.23□□□□□ -0.13
CCL4P13236 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCL4P13236 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.23□□□□□ -0.13
CCL4P13236 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CCL4P13236 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms