Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
DEFA4P12838 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
DEFA4P12838 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
DEFA4P12838 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
DEFA4P12838 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
DEFA4P12838 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
DEFA4P12838 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
DEFA4P12838 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
DEFA4P12838 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
DEFA4P12838 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
DEFA4P12838 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
DEFA4P12838 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
DEFA4P12838 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
DEFA4P12838 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
DEFA4P12838 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
DEFA4P12838 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
DEFA4P12838 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
DEFA4P12838 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
DEFA4P12838 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
DEFA4P12838 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
DEFA4P12838 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
DEFA4P12838 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC12.48□□□□□ -0.41
DEFA4P12838 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
DEFA4P12838 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC12.48□□□□□ -0.41
DEFA4P12838 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
DEFA4P12838 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
DEFA4P12838 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC12.48□□□□□ -0.41
DEFA4P12838 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
DEFA4P12838 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
DEFA4P12838 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
DEFA4P12838 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
DEFA4P12838 CD81-202ENST00000381036 880 ntTSL 3 BASIC12.48□□□□□ -0.41
DEFA4P12838 KRT18P13-201ENST00000400056 1290 ntBASIC12.48□□□□□ -0.41
DEFA4P12838 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC12.48□□□□□ -0.41
DEFA4P12838 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC12.48□□□□□ -0.41
DEFA4P12838 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
DEFA4P12838 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC12.48□□□□□ -0.41
DEFA4P12838 SUOX-214ENST00000551841 906 ntTSL 3 BASIC12.48□□□□□ -0.41
DEFA4P12838 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC12.48□□□□□ -0.41
DEFA4P12838 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
DEFA4P12838 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC12.48□□□□□ -0.41
DEFA4P12838 RN7SL828P-201ENST00000607615 303 ntBASIC12.48□□□□□ -0.41
DEFA4P12838 AL596442.2-201ENST00000610240 980 ntBASIC12.48□□□□□ -0.41
DEFA4P12838 AC007967.4-201ENST00000614700 386 ntBASIC12.48□□□□□ -0.41
DEFA4P12838 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
DEFA4P12838 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC12.48□□□□□ -0.41
DEFA4P12838 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
DEFA4P12838 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC12.48□□□□□ -0.41
DEFA4P12838 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
DEFA4P12838 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC12.48□□□□□ -0.41
DEFA4P12838 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
DEFA4P12838 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
DEFA4P12838 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
DEFA4P12838 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
DEFA4P12838 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
DEFA4P12838 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC12.48□□□□□ -0.41
DEFA4P12838 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC12.48□□□□□ -0.41
DEFA4P12838 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC12.48□□□□□ -0.41
DEFA4P12838 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
DEFA4P12838 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC12.48□□□□□ -0.41
DEFA4P12838 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
DEFA4P12838 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
DEFA4P12838 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
DEFA4P12838 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
DEFA4P12838 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC12.48□□□□□ -0.41
DEFA4P12838 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
DEFA4P12838 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
DEFA4P12838 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
DEFA4P12838 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
DEFA4P12838 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
DEFA4P12838 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
DEFA4P12838 AC126365.1-201ENST00000578585 1514 ntBASIC12.47□□□□□ -0.41
DEFA4P12838 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC12.47□□□□□ -0.41
DEFA4P12838 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
DEFA4P12838 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC12.47□□□□□ -0.41
DEFA4P12838 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
DEFA4P12838 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
DEFA4P12838 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
DEFA4P12838 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC12.47□□□□□ -0.41
DEFA4P12838 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
DEFA4P12838 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
DEFA4P12838 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
DEFA4P12838 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC12.47□□□□□ -0.41
DEFA4P12838 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC12.47□□□□□ -0.41
DEFA4P12838 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC12.47□□□□□ -0.41
DEFA4P12838 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
DEFA4P12838 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
DEFA4P12838 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
DEFA4P12838 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
DEFA4P12838 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
DEFA4P12838 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC12.47□□□□□ -0.41
DEFA4P12838 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
DEFA4P12838 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
DEFA4P12838 HNRNPFP1-201ENST00000391730 1133 ntBASIC12.47□□□□□ -0.41
DEFA4P12838 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
DEFA4P12838 FO393414.2-201ENST00000405153 598 ntBASIC12.47□□□□□ -0.41
DEFA4P12838 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
DEFA4P12838 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
DEFA4P12838 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC12.47□□□□□ -0.41
DEFA4P12838 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC12.47□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms