Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 KRT8P31-201ENST00000504812 1408 ntBASIC16.9■□□□□ 0.3
COL11A1P12107 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
COL11A1P12107 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.3
COL11A1P12107 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC16.89■□□□□ 0.29
COL11A1P12107 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
COL11A1P12107 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.89■□□□□ 0.29
COL11A1P12107 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COL11A1P12107 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC16.89■□□□□ 0.29
COL11A1P12107 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COL11A1P12107 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
COL11A1P12107 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC16.89■□□□□ 0.29
COL11A1P12107 LDHBP1-201ENST00000455730 1119 ntBASIC16.89■□□□□ 0.29
COL11A1P12107 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
COL11A1P12107 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
COL11A1P12107 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC16.89■□□□□ 0.29
COL11A1P12107 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC16.89■□□□□ 0.29
COL11A1P12107 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC16.89■□□□□ 0.29
COL11A1P12107 AC242376.1-201ENST00000559033 726 ntBASIC16.89■□□□□ 0.29
COL11A1P12107 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC16.89■□□□□ 0.29
COL11A1P12107 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC16.89■□□□□ 0.29
COL11A1P12107 AL109837.1-201ENST00000603272 613 ntBASIC16.89■□□□□ 0.29
COL11A1P12107 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC16.89■□□□□ 0.29
COL11A1P12107 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
COL11A1P12107 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.89■□□□□ 0.29
COL11A1P12107 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
COL11A1P12107 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
COL11A1P12107 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC16.89■□□□□ 0.29
COL11A1P12107 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC16.89■□□□□ 0.29
COL11A1P12107 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
COL11A1P12107 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COL11A1P12107 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COL11A1P12107 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC16.89■□□□□ 0.29
COL11A1P12107 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.89■□□□□ 0.29
COL11A1P12107 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COL11A1P12107 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
COL11A1P12107 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COL11A1P12107 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
COL11A1P12107 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
COL11A1P12107 NCR3-202ENST00000376071 541 ntTSL 5 BASIC16.89■□□□□ 0.29
COL11A1P12107 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
COL11A1P12107 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC16.89■□□□□ 0.29
COL11A1P12107 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC16.89■□□□□ 0.29
COL11A1P12107 U62317.3-201ENST00000608319 855 ntBASIC16.89■□□□□ 0.29
COL11A1P12107 AL353770.1-201ENST00000614915 403 ntBASIC16.89■□□□□ 0.29
COL11A1P12107 AC051619.9-201ENST00000623237 597 ntBASIC16.89■□□□□ 0.29
COL11A1P12107 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COL11A1P12107 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
COL11A1P12107 RAN-210ENST00000541630 1475 ntTSL 2 BASIC16.89■□□□□ 0.29
COL11A1P12107 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
COL11A1P12107 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
COL11A1P12107 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
COL11A1P12107 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
COL11A1P12107 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.88■□□□□ 0.29
COL11A1P12107 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL11A1P12107 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.88■□□□□ 0.29
COL11A1P12107 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
COL11A1P12107 AC006480.2-201ENST00000609770 1337 ntBASIC16.88■□□□□ 0.29
COL11A1P12107 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
COL11A1P12107 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.88■□□□□ 0.29
COL11A1P12107 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC16.88■□□□□ 0.29
COL11A1P12107 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
COL11A1P12107 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC16.88■□□□□ 0.29
COL11A1P12107 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC16.88■□□□□ 0.29
COL11A1P12107 NOC2LP1-201ENST00000450578 752 ntBASIC16.88■□□□□ 0.29
COL11A1P12107 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
COL11A1P12107 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC16.88■□□□□ 0.29
COL11A1P12107 MIR3188-201ENST00000583494 85 ntBASIC16.88■□□□□ 0.29
COL11A1P12107 HPN-206ENST00000597419 1212 ntTSL 5 BASIC16.88■□□□□ 0.29
COL11A1P12107 AC009884.2-201ENST00000603110 324 ntBASIC16.88■□□□□ 0.29
COL11A1P12107 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC16.88■□□□□ 0.29
COL11A1P12107 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL11A1P12107 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL11A1P12107 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
COL11A1P12107 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL11A1P12107 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL11A1P12107 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL11A1P12107 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC16.88■□□□□ 0.29
COL11A1P12107 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL11A1P12107 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
COL11A1P12107 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
COL11A1P12107 FRMPD2B-201ENST00000431305 1347 ntBASIC16.87■□□□□ 0.29
COL11A1P12107 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
COL11A1P12107 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
COL11A1P12107 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL11A1P12107 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
COL11A1P12107 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL11A1P12107 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.87■□□□□ 0.29
COL11A1P12107 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL11A1P12107 RPL17P11-201ENST00000417593 544 ntBASIC16.87■□□□□ 0.29
COL11A1P12107 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC16.87■□□□□ 0.29
COL11A1P12107 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC16.87■□□□□ 0.29
COL11A1P12107 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC16.87■□□□□ 0.29
COL11A1P12107 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC16.87■□□□□ 0.29
COL11A1P12107 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
COL11A1P12107 RN7SL555P-201ENST00000584742 339 ntBASIC16.87■□□□□ 0.29
COL11A1P12107 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL11A1P12107 AC006453.1-201ENST00000636037 1257 ntBASIC16.87■□□□□ 0.29
COL11A1P12107 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL11A1P12107 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL11A1P12107 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms