Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.82□□□□□ -0.2
FREM3P0C091 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC13.82□□□□□ -0.2
FREM3P0C091 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
FREM3P0C091 AP001889.1-201ENST00000525414 633 ntBASIC13.82□□□□□ -0.2
FREM3P0C091 RPL8-205ENST00000527914 551 ntTSL 3 BASIC13.82□□□□□ -0.2
FREM3P0C091 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC13.82□□□□□ -0.2
FREM3P0C091 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC13.82□□□□□ -0.2
FREM3P0C091 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.82□□□□□ -0.2
FREM3P0C091 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
FREM3P0C091 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
FREM3P0C091 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
FREM3P0C091 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
FREM3P0C091 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
FREM3P0C091 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
FREM3P0C091 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
FREM3P0C091 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
FREM3P0C091 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
FREM3P0C091 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC13.82□□□□□ -0.2
FREM3P0C091 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
FREM3P0C091 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
FREM3P0C091 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
FREM3P0C091 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
FREM3P0C091 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
FREM3P0C091 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
FREM3P0C091 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
FREM3P0C091 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
FREM3P0C091 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
FREM3P0C091 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
FREM3P0C091 KRT8P44-201ENST00000441609 1350 ntBASIC13.81□□□□□ -0.2
FREM3P0C091 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
FREM3P0C091 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.81□□□□□ -0.2
FREM3P0C091 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
FREM3P0C091 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC13.81□□□□□ -0.2
FREM3P0C091 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC13.81□□□□□ -0.2
FREM3P0C091 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
FREM3P0C091 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
FREM3P0C091 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC13.81□□□□□ -0.2
FREM3P0C091 AC007969.1-201ENST00000433675 447 ntBASIC13.81□□□□□ -0.2
FREM3P0C091 FAM8A4P-201ENST00000435433 1213 ntBASIC13.81□□□□□ -0.2
FREM3P0C091 KLF2P4-201ENST00000451959 1225 ntBASIC13.81□□□□□ -0.2
FREM3P0C091 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC13.81□□□□□ -0.2
FREM3P0C091 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC13.81□□□□□ -0.2
FREM3P0C091 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC13.81□□□□□ -0.2
FREM3P0C091 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.81□□□□□ -0.2
FREM3P0C091 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
FREM3P0C091 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
FREM3P0C091 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC13.81□□□□□ -0.2
FREM3P0C091 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC13.81□□□□□ -0.2
FREM3P0C091 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.81□□□□□ -0.2
FREM3P0C091 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
FREM3P0C091 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
FREM3P0C091 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
FREM3P0C091 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
FREM3P0C091 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
FREM3P0C091 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
FREM3P0C091 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
FREM3P0C091 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC13.81□□□□□ -0.2
FREM3P0C091 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
FREM3P0C091 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
FREM3P0C091 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
FREM3P0C091 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
FREM3P0C091 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
FREM3P0C091 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
FREM3P0C091 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC13.81□□□□□ -0.2
FREM3P0C091 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
FREM3P0C091 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
FREM3P0C091 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
FREM3P0C091 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
FREM3P0C091 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
FREM3P0C091 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC13.81□□□□□ -0.2
FREM3P0C091 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
FREM3P0C091 AC106820.3-201ENST00000561653 397 ntBASIC13.81□□□□□ -0.2
FREM3P0C091 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC13.81□□□□□ -0.2
FREM3P0C091 LARP4-220ENST00000615080 856 ntTSL 5 BASIC13.81□□□□□ -0.2
FREM3P0C091 AC138951.2-201ENST00000623455 1161 ntBASIC13.81□□□□□ -0.2
FREM3P0C091 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
FREM3P0C091 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
FREM3P0C091 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC13.8□□□□□ -0.2
FREM3P0C091 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.8□□□□□ -0.2
FREM3P0C091 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC13.8□□□□□ -0.2
FREM3P0C091 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
FREM3P0C091 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
FREM3P0C091 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
FREM3P0C091 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC13.8□□□□□ -0.2
FREM3P0C091 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
FREM3P0C091 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC13.8□□□□□ -0.2
FREM3P0C091 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC13.8□□□□□ -0.2
FREM3P0C091 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.8□□□□□ -0.2
FREM3P0C091 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
FREM3P0C091 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
FREM3P0C091 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.8□□□□□ -0.2
FREM3P0C091 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
FREM3P0C091 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
FREM3P0C091 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
FREM3P0C091 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
FREM3P0C091 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
FREM3P0C091 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
FREM3P0C091 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
FREM3P0C091 AC004945.1-201ENST00000416738 983 ntBASIC13.8□□□□□ -0.2
FREM3P0C091 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms