Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MMP2P08253 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC15.27■□□□□ 0.04
MMP2P08253 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
MMP2P08253 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
MMP2P08253 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
MMP2P08253 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
MMP2P08253 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.27■□□□□ 0.04
MMP2P08253 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
MMP2P08253 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
MMP2P08253 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
MMP2P08253 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
MMP2P08253 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
MMP2P08253 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
MMP2P08253 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
MMP2P08253 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
MMP2P08253 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
MMP2P08253 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.27■□□□□ 0.04
MMP2P08253 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
MMP2P08253 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
MMP2P08253 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
MMP2P08253 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC15.27■□□□□ 0.04
MMP2P08253 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC15.27■□□□□ 0.04
MMP2P08253 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC15.27■□□□□ 0.04
MMP2P08253 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC15.27■□□□□ 0.04
MMP2P08253 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC15.27■□□□□ 0.04
MMP2P08253 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
MMP2P08253 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
MMP2P08253 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC15.27■□□□□ 0.04
MMP2P08253 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
MMP2P08253 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC15.27■□□□□ 0.04
MMP2P08253 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
MMP2P08253 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
MMP2P08253 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
MMP2P08253 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
MMP2P08253 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
MMP2P08253 AL390755.1-201ENST00000623716 2027 ntBASIC15.27■□□□□ 0.03
MMP2P08253 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.27■□□□□ 0.03
MMP2P08253 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
MMP2P08253 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
MMP2P08253 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
MMP2P08253 MTHFR-210ENST00000641407 2387 ntBASIC15.27■□□□□ 0.03
MMP2P08253 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.27■□□□□ 0.03
MMP2P08253 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
MMP2P08253 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
MMP2P08253 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
MMP2P08253 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
MMP2P08253 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
MMP2P08253 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC15.27■□□□□ 0.03
MMP2P08253 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
MMP2P08253 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MMP2P08253 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
MMP2P08253 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
MMP2P08253 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MMP2P08253 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
MMP2P08253 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC15.26■□□□□ 0.03
MMP2P08253 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MMP2P08253 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MMP2P08253 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MMP2P08253 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MMP2P08253 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
MMP2P08253 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
MMP2P08253 EDF1-203ENST00000371649 790 ntTSL 2 BASIC15.26■□□□□ 0.03
MMP2P08253 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC15.26■□□□□ 0.03
MMP2P08253 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC15.26■□□□□ 0.03
MMP2P08253 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.26■□□□□ 0.03
MMP2P08253 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC15.26■□□□□ 0.03
MMP2P08253 BCRP2-202ENST00000447763 634 ntBASIC15.26■□□□□ 0.03
MMP2P08253 GAPDHP21-201ENST00000450301 1010 ntBASIC15.26■□□□□ 0.03
MMP2P08253 BCRP6-201ENST00000510112 632 ntBASIC15.26■□□□□ 0.03
MMP2P08253 BCRP7-201ENST00000511549 544 ntBASIC15.26■□□□□ 0.03
MMP2P08253 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC15.26■□□□□ 0.03
MMP2P08253 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC15.26■□□□□ 0.03
MMP2P08253 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC15.26■□□□□ 0.03
MMP2P08253 BTNL10-201ENST00000595971 695 ntBASIC15.26■□□□□ 0.03
MMP2P08253 AC233724.13-201ENST00000598383 410 ntBASIC15.26■□□□□ 0.03
MMP2P08253 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC15.26■□□□□ 0.03
MMP2P08253 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC15.26■□□□□ 0.03
MMP2P08253 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
MMP2P08253 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MMP2P08253 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
MMP2P08253 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
MMP2P08253 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
MMP2P08253 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.26■□□□□ 0.03
MMP2P08253 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MMP2P08253 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MMP2P08253 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
MMP2P08253 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MMP2P08253 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
MMP2P08253 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MMP2P08253 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.25■□□□□ 0.03
MMP2P08253 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MMP2P08253 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.25■□□□□ 0.03
MMP2P08253 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
MMP2P08253 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MMP2P08253 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
MMP2P08253 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
MMP2P08253 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MMP2P08253 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MMP2P08253 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MMP2P08253 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms