Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC18.22■□□□□ 0.51
CHGBP05060 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC18.22■□□□□ 0.51
CHGBP05060 CSF2RBP1-201ENST00000447905 391 ntBASIC18.22■□□□□ 0.51
CHGBP05060 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CHGBP05060 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CHGBP05060 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
CHGBP05060 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC18.22■□□□□ 0.51
CHGBP05060 HNRNPA1P48-202ENST00000565308 961 ntBASIC18.22■□□□□ 0.51
CHGBP05060 MIR6805-201ENST00000615055 62 ntBASIC18.22■□□□□ 0.51
CHGBP05060 ENPP7P14-201ENST00000621765 1040 ntBASIC18.22■□□□□ 0.51
CHGBP05060 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CHGBP05060 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CHGBP05060 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC18.22■□□□□ 0.51
CHGBP05060 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHGBP05060 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHGBP05060 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHGBP05060 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHGBP05060 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHGBP05060 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CHGBP05060 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHGBP05060 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHGBP05060 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHGBP05060 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHGBP05060 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CHGBP05060 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHGBP05060 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC18.21■□□□□ 0.51
CHGBP05060 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHGBP05060 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
CHGBP05060 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CHGBP05060 AC006001.1-201ENST00000325130 474 ntBASIC18.21■□□□□ 0.51
CHGBP05060 GUK1-206ENST00000366723 845 ntTSL 5 BASIC18.21■□□□□ 0.51
CHGBP05060 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHGBP05060 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC18.21■□□□□ 0.51
CHGBP05060 OLR1-203ENST00000432556 950 ntTSL 2 BASIC18.21■□□□□ 0.51
CHGBP05060 KRT223P-202ENST00000449164 1292 ntBASIC18.21■□□□□ 0.51
CHGBP05060 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CHGBP05060 APRT-204ENST00000563655 709 ntTSL 5 BASIC18.21■□□□□ 0.51
CHGBP05060 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC18.21■□□□□ 0.51
CHGBP05060 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC18.21■□□□□ 0.51
CHGBP05060 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHGBP05060 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC18.21■□□□□ 0.51
CHGBP05060 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHGBP05060 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHGBP05060 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHGBP05060 AC013726.1-201ENST00000563747 2285 ntBASIC18.21■□□□□ 0.51
CHGBP05060 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC18.21■□□□□ 0.51
CHGBP05060 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CHGBP05060 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHGBP05060 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC18.21■□□□□ 0.51
CHGBP05060 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHGBP05060 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC18.21■□□□□ 0.51
CHGBP05060 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHGBP05060 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
CHGBP05060 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHGBP05060 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CHGBP05060 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
CHGBP05060 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.5
CHGBP05060 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.5
CHGBP05060 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CHGBP05060 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHGBP05060 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CHGBP05060 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
CHGBP05060 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CHGBP05060 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHGBP05060 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CHGBP05060 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC18.2■□□□□ 0.5
CHGBP05060 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC18.2■□□□□ 0.5
CHGBP05060 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CHGBP05060 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHGBP05060 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHGBP05060 MPV17-205ENST00000402310 906 ntTSL 5 BASIC18.2■□□□□ 0.5
CHGBP05060 MIR1202-201ENST00000408529 83 ntBASIC18.2■□□□□ 0.5
CHGBP05060 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHGBP05060 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHGBP05060 PFN2-215ENST00000497148 743 ntTSL 4 BASIC18.2■□□□□ 0.5
CHGBP05060 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC18.2■□□□□ 0.5
CHGBP05060 RNA5SP486-201ENST00000515961 83 ntBASIC18.2■□□□□ 0.5
CHGBP05060 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC18.2■□□□□ 0.5
CHGBP05060 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHGBP05060 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC18.2■□□□□ 0.5
CHGBP05060 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHGBP05060 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHGBP05060 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CHGBP05060 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHGBP05060 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC18.2■□□□□ 0.5
CHGBP05060 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CHGBP05060 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC18.2■□□□□ 0.5
CHGBP05060 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHGBP05060 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC18.2■□□□□ 0.5
CHGBP05060 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CHGBP05060 AC103702.1-201ENST00000548801 2630 ntBASIC18.19■□□□□ 0.5
CHGBP05060 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHGBP05060 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CHGBP05060 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHGBP05060 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
CHGBP05060 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHGBP05060 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHGBP05060 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CHGBP05060 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CHGBP05060 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms