Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CD74P04233 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC12.84□□□□□ -0.35
CD74P04233 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CD74P04233 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC12.84□□□□□ -0.35
CD74P04233 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CD74P04233 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
CD74P04233 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CD74P04233 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC12.84□□□□□ -0.35
CD74P04233 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CD74P04233 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CD74P04233 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
CD74P04233 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CD74P04233 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CD74P04233 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
CD74P04233 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CD74P04233 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
CD74P04233 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CD74P04233 KCP-203ENST00000610776 5108 ntTSL 5 BASIC12.83□□□□□ -0.35
CD74P04233 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.35
CD74P04233 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
CD74P04233 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
CD74P04233 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
CD74P04233 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
CD74P04233 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC12.83□□□□□ -0.35
CD74P04233 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC12.83□□□□□ -0.35
CD74P04233 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
CD74P04233 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.35
CD74P04233 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
CD74P04233 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CD74P04233 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CD74P04233 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
CD74P04233 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CD74P04233 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC12.83□□□□□ -0.36
CD74P04233 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC12.83□□□□□ -0.36
CD74P04233 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
CD74P04233 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CD74P04233 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CD74P04233 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC12.83□□□□□ -0.36
CD74P04233 KRT18P2-201ENST00000447938 1258 ntBASIC12.83□□□□□ -0.36
CD74P04233 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
CD74P04233 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC12.83□□□□□ -0.36
CD74P04233 RNF34-208ENST00000555076 593 ntTSL 3 BASIC12.83□□□□□ -0.36
CD74P04233 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC12.83□□□□□ -0.36
CD74P04233 KRT8P23-201ENST00000560090 1207 ntBASIC12.83□□□□□ -0.36
CD74P04233 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC12.83□□□□□ -0.36
CD74P04233 LITAF-211ENST00000572255 516 ntTSL 4 BASIC12.83□□□□□ -0.36
CD74P04233 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
CD74P04233 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC12.83□□□□□ -0.36
CD74P04233 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC12.83□□□□□ -0.36
CD74P04233 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC12.83□□□□□ -0.36
CD74P04233 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CD74P04233 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CD74P04233 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CD74P04233 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
CD74P04233 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CD74P04233 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC12.83□□□□□ -0.36
CD74P04233 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
CD74P04233 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CD74P04233 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CD74P04233 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC12.83□□□□□ -0.36
CD74P04233 USP31-203ENST00000567975 2142 ntTSL 2 BASIC12.83□□□□□ -0.36
CD74P04233 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
CD74P04233 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
CD74P04233 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC12.83□□□□□ -0.36
CD74P04233 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
CD74P04233 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CD74P04233 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
CD74P04233 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CD74P04233 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC12.83□□□□□ -0.36
CD74P04233 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CD74P04233 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CD74P04233 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC12.83□□□□□ -0.36
CD74P04233 ST20-AS1-201ENST00000560255 4223 ntBASIC12.83□□□□□ -0.36
CD74P04233 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC12.83□□□□□ -0.36
CD74P04233 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
CD74P04233 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CD74P04233 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CD74P04233 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC12.82□□□□□ -0.36
CD74P04233 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CD74P04233 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CD74P04233 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CD74P04233 MAPT-IT1-201ENST00000624111 3016 ntBASIC12.82□□□□□ -0.36
CD74P04233 DEK-201ENST00000244776 1441 ntTSL 2 BASIC12.82□□□□□ -0.36
CD74P04233 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CD74P04233 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CD74P04233 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
CD74P04233 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC12.82□□□□□ -0.36
CD74P04233 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC12.82□□□□□ -0.36
CD74P04233 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
CD74P04233 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC12.82□□□□□ -0.36
CD74P04233 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CD74P04233 AC074338.1-201ENST00000416825 156 ntBASIC12.82□□□□□ -0.36
CD74P04233 PTK7-212ENST00000476760 902 ntTSL 2 BASIC12.82□□□□□ -0.36
CD74P04233 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC12.82□□□□□ -0.36
CD74P04233 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC12.82□□□□□ -0.36
CD74P04233 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
CD74P04233 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC12.82□□□□□ -0.36
CD74P04233 AC243562.1-201ENST00000560672 389 ntBASIC12.82□□□□□ -0.36
CD74P04233 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC12.82□□□□□ -0.36
CD74P04233 IGHV3OR16-6-201ENST00000568775 360 ntBASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms