Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 KRT18P34-201ENST00000488218 1270 ntBASIC14.83□□□□□ -0.04
LDLRP01130 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.83□□□□□ -0.04
LDLRP01130 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
LDLRP01130 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.83□□□□□ -0.04
LDLRP01130 NOP2-211ENST00000540228 668 ntTSL 2 BASIC14.83□□□□□ -0.04
LDLRP01130 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC14.83□□□□□ -0.04
LDLRP01130 POLE2-203ENST00000553805 496 ntTSL 2 BASIC14.83□□□□□ -0.04
LDLRP01130 AC009407.1-201ENST00000568958 598 ntBASIC14.83□□□□□ -0.04
LDLRP01130 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
LDLRP01130 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
LDLRP01130 AC008738.7-201ENST00000609744 511 ntBASIC14.83□□□□□ -0.04
LDLRP01130 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.83□□□□□ -0.04
LDLRP01130 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC14.83□□□□□ -0.04
LDLRP01130 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.83□□□□□ -0.04
LDLRP01130 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LDLRP01130 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.83□□□□□ -0.04
LDLRP01130 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.83□□□□□ -0.04
LDLRP01130 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
LDLRP01130 AC126335.2-201ENST00000623362 4637 ntBASIC14.83□□□□□ -0.04
LDLRP01130 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LDLRP01130 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.83□□□□□ -0.04
LDLRP01130 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LDLRP01130 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.83□□□□□ -0.04
LDLRP01130 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LDLRP01130 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
LDLRP01130 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
LDLRP01130 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
LDLRP01130 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
LDLRP01130 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.82□□□□□ -0.04
LDLRP01130 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.82□□□□□ -0.04
LDLRP01130 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.82□□□□□ -0.04
LDLRP01130 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LDLRP01130 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LDLRP01130 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.82□□□□□ -0.04
LDLRP01130 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
LDLRP01130 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
LDLRP01130 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LDLRP01130 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LDLRP01130 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LDLRP01130 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LDLRP01130 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
LDLRP01130 AC117489.1-201ENST00000625169 3217 ntBASIC14.82□□□□□ -0.04
LDLRP01130 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LDLRP01130 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LDLRP01130 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LDLRP01130 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.82□□□□□ -0.04
LDLRP01130 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LDLRP01130 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
LDLRP01130 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LDLRP01130 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LDLRP01130 DGCR5-201ENST00000399539 862 ntBASIC14.82□□□□□ -0.04
LDLRP01130 AP006294.1-201ENST00000415407 339 ntBASIC14.82□□□□□ -0.04
LDLRP01130 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.82□□□□□ -0.04
LDLRP01130 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.82□□□□□ -0.04
LDLRP01130 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14.82□□□□□ -0.04
LDLRP01130 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC14.82□□□□□ -0.04
LDLRP01130 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LDLRP01130 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.82□□□□□ -0.04
LDLRP01130 AC106886.1-201ENST00000568660 600 ntBASIC14.82□□□□□ -0.04
LDLRP01130 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.82□□□□□ -0.04
LDLRP01130 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LDLRP01130 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.82□□□□□ -0.04
LDLRP01130 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LDLRP01130 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LDLRP01130 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LDLRP01130 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.82□□□□□ -0.04
LDLRP01130 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
LDLRP01130 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
LDLRP01130 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LDLRP01130 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
LDLRP01130 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LDLRP01130 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
LDLRP01130 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LDLRP01130 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LDLRP01130 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.82□□□□□ -0.04
LDLRP01130 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.82□□□□□ -0.04
LDLRP01130 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
LDLRP01130 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
LDLRP01130 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LDLRP01130 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.82□□□□□ -0.04
LDLRP01130 AC005840.4-201ENST00000541242 2494 ntBASIC14.82□□□□□ -0.04
LDLRP01130 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.82□□□□□ -0.04
LDLRP01130 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LDLRP01130 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LDLRP01130 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LDLRP01130 AP3S2-216ENST00000617003 1561 ntBASIC14.81□□□□□ -0.04
LDLRP01130 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LDLRP01130 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.81□□□□□ -0.04
LDLRP01130 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
LDLRP01130 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LDLRP01130 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
LDLRP01130 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LDLRP01130 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.81□□□□□ -0.04
LDLRP01130 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LDLRP01130 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.81□□□□□ -0.04
LDLRP01130 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
LDLRP01130 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LDLRP01130 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.81□□□□□ -0.04
LDLRP01130 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LDLRP01130 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms