Protein–RNA interactions for Protein: O95206

PCDH8, Protocadherin-8, humanhuman

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8O95206 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.21■□□□□ 0.02
PCDH8O95206 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
PCDH8O95206 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
PCDH8O95206 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
PCDH8O95206 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
PCDH8O95206 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.21■□□□□ 0.02
PCDH8O95206 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDH8O95206 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC15.2■□□□□ 0.02
PCDH8O95206 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDH8O95206 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDH8O95206 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PCDH8O95206 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.2■□□□□ 0.02
PCDH8O95206 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
PCDH8O95206 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.2■□□□□ 0.02
PCDH8O95206 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC15.2■□□□□ 0.02
PCDH8O95206 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDH8O95206 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDH8O95206 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
PCDH8O95206 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PCDH8O95206 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDH8O95206 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDH8O95206 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDH8O95206 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PCDH8O95206 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.2■□□□□ 0.02
PCDH8O95206 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDH8O95206 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDH8O95206 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDH8O95206 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PCDH8O95206 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDH8O95206 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC15.2■□□□□ 0.02
PCDH8O95206 AC245100.3-201ENST00000441281 285 ntBASIC15.2■□□□□ 0.02
PCDH8O95206 PFN2-215ENST00000497148 743 ntTSL 4 BASIC15.2■□□□□ 0.02
PCDH8O95206 AGER-214ENST00000538695 487 ntTSL 2 BASIC15.2■□□□□ 0.02
PCDH8O95206 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDH8O95206 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.2■□□□□ 0.02
PCDH8O95206 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC15.2■□□□□ 0.02
PCDH8O95206 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC15.2■□□□□ 0.02
PCDH8O95206 AC091271.1-201ENST00000611877 1162 ntBASIC15.2■□□□□ 0.02
PCDH8O95206 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PCDH8O95206 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
PCDH8O95206 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC15.2■□□□□ 0.02
PCDH8O95206 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDH8O95206 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PCDH8O95206 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PCDH8O95206 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.2■□□□□ 0.02
PCDH8O95206 AC020658.6-201ENST00000623564 1870 ntBASIC15.2■□□□□ 0.02
PCDH8O95206 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
PCDH8O95206 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PCDH8O95206 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.2■□□□□ 0.02
PCDH8O95206 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDH8O95206 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
PCDH8O95206 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDH8O95206 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDH8O95206 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDH8O95206 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDH8O95206 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
PCDH8O95206 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDH8O95206 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.19■□□□□ 0.02
PCDH8O95206 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDH8O95206 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDH8O95206 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
PCDH8O95206 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDH8O95206 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PCDH8O95206 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.19■□□□□ 0.02
PCDH8O95206 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PCDH8O95206 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDH8O95206 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.19■□□□□ 0.02
PCDH8O95206 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDH8O95206 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC15.19■□□□□ 0.02
PCDH8O95206 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDH8O95206 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.19■□□□□ 0.02
PCDH8O95206 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PCDH8O95206 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.19■□□□□ 0.02
PCDH8O95206 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PCDH8O95206 AL157414.3-201ENST00000624276 1954 ntBASIC15.19■□□□□ 0.02
PCDH8O95206 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDH8O95206 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
PCDH8O95206 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
PCDH8O95206 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC15.19■□□□□ 0.02
PCDH8O95206 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC15.19■□□□□ 0.02
PCDH8O95206 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC15.19■□□□□ 0.02
PCDH8O95206 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDH8O95206 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PCDH8O95206 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC15.19■□□□□ 0.02
PCDH8O95206 DERL2-202ENST00000570848 657 ntTSL 5 BASIC15.19■□□□□ 0.02
PCDH8O95206 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC15.19■□□□□ 0.02
PCDH8O95206 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDH8O95206 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.19■□□□□ 0.02
PCDH8O95206 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.19■□□□□ 0.02
PCDH8O95206 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDH8O95206 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PCDH8O95206 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.19■□□□□ 0.02
PCDH8O95206 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.19■□□□□ 0.02
PCDH8O95206 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PCDH8O95206 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.19■□□□□ 0.02
PCDH8O95206 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDH8O95206 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PCDH8O95206 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDH8O95206 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.19■□□□□ 0.02
PCDH8O95206 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms