Protein–RNA interactions for Protein: O60504

SORBS3, Vinexin, humanhuman

Predictions only

Length 671 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SORBS3O60504 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SORBS3O60504 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SORBS3O60504 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
SORBS3O60504 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
SORBS3O60504 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SORBS3O60504 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC17.13■□□□□ 0.33
SORBS3O60504 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SORBS3O60504 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SORBS3O60504 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SORBS3O60504 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SORBS3O60504 GSN-206ENST00000394353 2311 ntTSL 2 BASIC17.13■□□□□ 0.33
SORBS3O60504 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SORBS3O60504 PGR-210ENST00000619228 3038 ntTSL 5 BASIC17.13■□□□□ 0.33
SORBS3O60504 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
SORBS3O60504 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SORBS3O60504 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SORBS3O60504 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SORBS3O60504 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SORBS3O60504 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SORBS3O60504 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SORBS3O60504 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
SORBS3O60504 AC103702.1-201ENST00000548801 2630 ntBASIC17.12■□□□□ 0.33
SORBS3O60504 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC17.12■□□□□ 0.33
SORBS3O60504 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
SORBS3O60504 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SORBS3O60504 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SORBS3O60504 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC17.12■□□□□ 0.33
SORBS3O60504 BTBD6P1-201ENST00000412176 1267 ntBASIC17.12■□□□□ 0.33
SORBS3O60504 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC17.12■□□□□ 0.33
SORBS3O60504 MTX1P1-201ENST00000440904 838 ntBASIC17.12■□□□□ 0.33
SORBS3O60504 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC17.12■□□□□ 0.33
SORBS3O60504 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC17.12■□□□□ 0.33
SORBS3O60504 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC17.12■□□□□ 0.33
SORBS3O60504 HLA-DQB2-231ENST00000435145 2026 ntBASIC17.12■□□□□ 0.33
SORBS3O60504 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
SORBS3O60504 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SORBS3O60504 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SORBS3O60504 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SORBS3O60504 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SORBS3O60504 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SORBS3O60504 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SORBS3O60504 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
SORBS3O60504 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SORBS3O60504 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SORBS3O60504 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.12■□□□□ 0.33
SORBS3O60504 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC17.12■□□□□ 0.33
SORBS3O60504 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC17.12■□□□□ 0.33
SORBS3O60504 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SORBS3O60504 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SORBS3O60504 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC17.12■□□□□ 0.33
SORBS3O60504 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SORBS3O60504 BANP-201ENST00000286122 2368 ntTSL 5 BASIC17.11■□□□□ 0.33
SORBS3O60504 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SORBS3O60504 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
SORBS3O60504 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SORBS3O60504 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SORBS3O60504 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SORBS3O60504 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SORBS3O60504 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SORBS3O60504 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC17.11■□□□□ 0.33
SORBS3O60504 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SORBS3O60504 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SORBS3O60504 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SORBS3O60504 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC17.11■□□□□ 0.33
SORBS3O60504 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SORBS3O60504 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SORBS3O60504 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC17.11■□□□□ 0.33
SORBS3O60504 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
SORBS3O60504 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SORBS3O60504 MIR1247-201ENST00000408206 136 ntBASIC17.11■□□□□ 0.33
SORBS3O60504 NME6-203ENST00000415644 849 ntTSL 2 BASIC17.11■□□□□ 0.33
SORBS3O60504 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SORBS3O60504 FAM8A4P-201ENST00000435433 1213 ntBASIC17.11■□□□□ 0.33
SORBS3O60504 CNN2P10-201ENST00000443067 918 ntBASIC17.11■□□□□ 0.33
SORBS3O60504 RPSAP36-202ENST00000494591 1261 ntBASIC17.11■□□□□ 0.33
SORBS3O60504 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SORBS3O60504 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC17.11■□□□□ 0.33
SORBS3O60504 AL391280.1-201ENST00000506969 1062 ntBASIC17.11■□□□□ 0.33
SORBS3O60504 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
SORBS3O60504 AC022616.1-201ENST00000518688 554 ntBASIC17.11■□□□□ 0.33
SORBS3O60504 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
SORBS3O60504 RN7SL48P-201ENST00000579283 293 ntBASIC17.11■□□□□ 0.33
SORBS3O60504 CYGB-203ENST00000589145 788 ntTSL 3 BASIC17.11■□□□□ 0.33
SORBS3O60504 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
SORBS3O60504 AL096828.3-201ENST00000615354 462 ntBASIC17.11■□□□□ 0.33
SORBS3O60504 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC17.11■□□□□ 0.33
SORBS3O60504 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SORBS3O60504 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC17.11■□□□□ 0.33
SORBS3O60504 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SORBS3O60504 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC17.11■□□□□ 0.33
SORBS3O60504 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SORBS3O60504 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SORBS3O60504 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SORBS3O60504 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC17.11■□□□□ 0.33
SORBS3O60504 LINC00554-201ENST00000564841 3011 ntBASIC17.11■□□□□ 0.33
SORBS3O60504 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SORBS3O60504 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SORBS3O60504 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SORBS3O60504 KRT8P4-201ENST00000509735 1454 ntBASIC17.11■□□□□ 0.33
SORBS3O60504 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms