Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
PAX4O43316 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
PAX4O43316 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
PAX4O43316 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC10.99□□□□□ -0.65
PAX4O43316 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
PAX4O43316 RERG-209ENST00000546331 1383 ntTSL 2 BASIC10.99□□□□□ -0.65
PAX4O43316 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
PAX4O43316 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC10.99□□□□□ -0.65
PAX4O43316 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
PAX4O43316 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
PAX4O43316 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
PAX4O43316 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC10.99□□□□□ -0.65
PAX4O43316 TP73-201ENST00000346387 4854 ntTSL 5 BASIC10.99□□□□□ -0.65
PAX4O43316 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
PAX4O43316 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
PAX4O43316 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
PAX4O43316 API5-202ENST00000420461 2009 ntTSL 2 BASIC10.99□□□□□ -0.65
PAX4O43316 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
PAX4O43316 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
PAX4O43316 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC10.99□□□□□ -0.65
PAX4O43316 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
PAX4O43316 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
PAX4O43316 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC10.99□□□□□ -0.65
PAX4O43316 REXO1L1P-201ENST00000379010 6598 ntBASIC10.99□□□□□ -0.65
PAX4O43316 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
PAX4O43316 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
PAX4O43316 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
PAX4O43316 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
PAX4O43316 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
PAX4O43316 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
PAX4O43316 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC10.98□□□□□ -0.65
PAX4O43316 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC10.98□□□□□ -0.65
PAX4O43316 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC10.98□□□□□ -0.65
PAX4O43316 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
PAX4O43316 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC10.98□□□□□ -0.65
PAX4O43316 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
PAX4O43316 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
PAX4O43316 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
PAX4O43316 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
PAX4O43316 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
PAX4O43316 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
PAX4O43316 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
PAX4O43316 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
PAX4O43316 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
PAX4O43316 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
PAX4O43316 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
PAX4O43316 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC10.98□□□□□ -0.65
PAX4O43316 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
PAX4O43316 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
PAX4O43316 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
PAX4O43316 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
PAX4O43316 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
PAX4O43316 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
PAX4O43316 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
PAX4O43316 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
PAX4O43316 OSM-203ENST00000403463 464 ntTSL 3 BASIC10.98□□□□□ -0.65
PAX4O43316 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC10.98□□□□□ -0.65
PAX4O43316 KRT18P64-201ENST00000434946 1219 ntBASIC10.98□□□□□ -0.65
PAX4O43316 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC10.98□□□□□ -0.65
PAX4O43316 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC10.98□□□□□ -0.65
PAX4O43316 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC10.98□□□□□ -0.65
PAX4O43316 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC10.98□□□□□ -0.65
PAX4O43316 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC10.98□□□□□ -0.65
PAX4O43316 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC10.98□□□□□ -0.65
PAX4O43316 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
PAX4O43316 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
PAX4O43316 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC10.98□□□□□ -0.65
PAX4O43316 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC10.98□□□□□ -0.65
PAX4O43316 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
PAX4O43316 AC009118.2-201ENST00000613275 655 ntBASIC10.98□□□□□ -0.65
PAX4O43316 AJ011932.1-201ENST00000621707 465 ntBASIC10.98□□□□□ -0.65
PAX4O43316 AC133485.6-201ENST00000624045 688 ntBASIC10.98□□□□□ -0.65
PAX4O43316 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC10.98□□□□□ -0.65
PAX4O43316 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC10.98□□□□□ -0.65
PAX4O43316 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
PAX4O43316 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC10.98□□□□□ -0.65
PAX4O43316 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
PAX4O43316 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
PAX4O43316 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
PAX4O43316 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
PAX4O43316 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
PAX4O43316 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
PAX4O43316 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
PAX4O43316 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC10.98□□□□□ -0.65
PAX4O43316 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
PAX4O43316 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
PAX4O43316 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
PAX4O43316 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
PAX4O43316 CYP2AB1P-202ENST00000454440 1456 ntBASIC10.98□□□□□ -0.65
PAX4O43316 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
PAX4O43316 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
PAX4O43316 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
PAX4O43316 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
PAX4O43316 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
PAX4O43316 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC10.98□□□□□ -0.65
PAX4O43316 AC006058.4-201ENST00000624016 1670 ntBASIC10.98□□□□□ -0.65
PAX4O43316 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC10.98□□□□□ -0.65
PAX4O43316 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
PAX4O43316 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC10.98□□□□□ -0.65
PAX4O43316 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms