Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
NDUFA1O15239 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC10.49□□□□□ -0.73
NDUFA1O15239 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
NDUFA1O15239 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC10.49□□□□□ -0.73
NDUFA1O15239 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
NDUFA1O15239 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
NDUFA1O15239 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
NDUFA1O15239 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC10.49□□□□□ -0.73
NDUFA1O15239 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC10.49□□□□□ -0.73
NDUFA1O15239 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC10.49□□□□□ -0.73
NDUFA1O15239 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
NDUFA1O15239 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
NDUFA1O15239 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC10.49□□□□□ -0.73
NDUFA1O15239 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
NDUFA1O15239 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
NDUFA1O15239 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
NDUFA1O15239 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
NDUFA1O15239 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
NDUFA1O15239 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
NDUFA1O15239 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC10.49□□□□□ -0.73
NDUFA1O15239 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
NDUFA1O15239 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
NDUFA1O15239 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC10.49□□□□□ -0.73
NDUFA1O15239 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
NDUFA1O15239 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
NDUFA1O15239 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
NDUFA1O15239 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC10.49□□□□□ -0.73
NDUFA1O15239 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC10.49□□□□□ -0.73
NDUFA1O15239 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
NDUFA1O15239 MST1P2-201ENST00000457982 2291 ntBASIC10.49□□□□□ -0.73
NDUFA1O15239 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC10.49□□□□□ -0.73
NDUFA1O15239 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
NDUFA1O15239 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC10.49□□□□□ -0.73
NDUFA1O15239 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
NDUFA1O15239 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
NDUFA1O15239 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
NDUFA1O15239 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
NDUFA1O15239 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC10.48□□□□□ -0.73
NDUFA1O15239 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
NDUFA1O15239 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC10.48□□□□□ -0.73
NDUFA1O15239 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC10.48□□□□□ -0.73
NDUFA1O15239 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC10.48□□□□□ -0.73
NDUFA1O15239 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC10.48□□□□□ -0.73
NDUFA1O15239 AP001267.2-201ENST00000532619 2086 ntBASIC10.48□□□□□ -0.73
NDUFA1O15239 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
NDUFA1O15239 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC10.48□□□□□ -0.73
NDUFA1O15239 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
NDUFA1O15239 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
NDUFA1O15239 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
NDUFA1O15239 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
NDUFA1O15239 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
NDUFA1O15239 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
NDUFA1O15239 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC10.48□□□□□ -0.73
NDUFA1O15239 AC131212.3-201ENST00000624087 4219 ntBASIC10.48□□□□□ -0.73
NDUFA1O15239 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC10.48□□□□□ -0.73
NDUFA1O15239 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
NDUFA1O15239 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
NDUFA1O15239 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC10.48□□□□□ -0.73
NDUFA1O15239 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
NDUFA1O15239 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC10.48□□□□□ -0.73
NDUFA1O15239 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
NDUFA1O15239 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC10.48□□□□□ -0.73
NDUFA1O15239 ELP6-209ENST00000446787 894 ntTSL 3 BASIC10.48□□□□□ -0.73
NDUFA1O15239 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC10.48□□□□□ -0.73
NDUFA1O15239 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC10.48□□□□□ -0.73
NDUFA1O15239 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC10.48□□□□□ -0.73
NDUFA1O15239 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC10.48□□□□□ -0.73
NDUFA1O15239 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC10.48□□□□□ -0.73
NDUFA1O15239 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC10.48□□□□□ -0.73
NDUFA1O15239 KRT8P23-201ENST00000560090 1207 ntBASIC10.48□□□□□ -0.73
NDUFA1O15239 IGHV3OR16-6-201ENST00000568775 360 ntBASIC10.48□□□□□ -0.73
NDUFA1O15239 AC120114.3-201ENST00000611923 658 ntBASIC10.48□□□□□ -0.73
NDUFA1O15239 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
NDUFA1O15239 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
NDUFA1O15239 CICP11-201ENST00000434745 2827 ntBASIC10.48□□□□□ -0.73
NDUFA1O15239 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC10.48□□□□□ -0.73
NDUFA1O15239 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC10.48□□□□□ -0.73
NDUFA1O15239 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC10.48□□□□□ -0.73
NDUFA1O15239 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
NDUFA1O15239 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC10.48□□□□□ -0.73
NDUFA1O15239 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC10.48□□□□□ -0.73
NDUFA1O15239 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
NDUFA1O15239 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
NDUFA1O15239 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC10.48□□□□□ -0.73
NDUFA1O15239 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC10.48□□□□□ -0.73
NDUFA1O15239 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC10.48□□□□□ -0.73
NDUFA1O15239 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
NDUFA1O15239 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
NDUFA1O15239 KRT8P37-201ENST00000451609 1420 ntBASIC10.48□□□□□ -0.73
NDUFA1O15239 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
NDUFA1O15239 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
NDUFA1O15239 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC10.48□□□□□ -0.73
NDUFA1O15239 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC10.48□□□□□ -0.73
NDUFA1O15239 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
NDUFA1O15239 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
NDUFA1O15239 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
NDUFA1O15239 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC10.48□□□□□ -0.73
NDUFA1O15239 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
NDUFA1O15239 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
NDUFA1O15239 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms