Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CHL1O00533 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC19.37■□□□□ 0.69
CHL1O00533 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC19.37■□□□□ 0.69
CHL1O00533 CDC23-208ENST00000505120 455 ntTSL 3 BASIC19.37■□□□□ 0.69
CHL1O00533 GCOM2-201ENST00000509133 1104 ntBASIC19.37■□□□□ 0.69
CHL1O00533 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC19.37■□□□□ 0.69
CHL1O00533 AC091271.1-201ENST00000611877 1162 ntBASIC19.37■□□□□ 0.69
CHL1O00533 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CHL1O00533 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHL1O00533 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC19.37■□□□□ 0.69
CHL1O00533 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHL1O00533 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHL1O00533 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
CHL1O00533 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHL1O00533 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHL1O00533 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHL1O00533 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC19.36■□□□□ 0.69
CHL1O00533 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
CHL1O00533 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CHL1O00533 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CHL1O00533 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHL1O00533 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHL1O00533 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHL1O00533 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHL1O00533 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHL1O00533 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHL1O00533 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC19.36■□□□□ 0.69
CHL1O00533 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC19.36■□□□□ 0.69
CHL1O00533 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHL1O00533 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CHL1O00533 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHL1O00533 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
CHL1O00533 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHL1O00533 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHL1O00533 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC19.36■□□□□ 0.69
CHL1O00533 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC19.36■□□□□ 0.69
CHL1O00533 AC010141.1-201ENST00000411585 623 ntBASIC19.36■□□□□ 0.69
CHL1O00533 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CHL1O00533 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC19.36■□□□□ 0.69
CHL1O00533 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC19.36■□□□□ 0.69
CHL1O00533 RN7SL219P-201ENST00000582872 296 ntBASIC19.36■□□□□ 0.69
CHL1O00533 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC19.36■□□□□ 0.69
CHL1O00533 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHL1O00533 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
CHL1O00533 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CHL1O00533 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC19.36■□□□□ 0.69
CHL1O00533 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
CHL1O00533 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC19.36■□□□□ 0.69
CHL1O00533 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHL1O00533 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC19.36■□□□□ 0.69
CHL1O00533 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CHL1O00533 AC144831.1-201ENST00000573312 2656 ntBASIC19.36■□□□□ 0.69
CHL1O00533 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHL1O00533 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CHL1O00533 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CHL1O00533 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHL1O00533 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CHL1O00533 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CHL1O00533 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CHL1O00533 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CHL1O00533 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHL1O00533 AC007292.2-201ENST00000593524 1812 ntBASIC19.35■□□□□ 0.69
CHL1O00533 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CHL1O00533 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CHL1O00533 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
CHL1O00533 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHL1O00533 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHL1O00533 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CHL1O00533 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHL1O00533 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHL1O00533 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHL1O00533 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHL1O00533 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHL1O00533 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC19.35■□□□□ 0.69
CHL1O00533 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHL1O00533 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHL1O00533 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC19.35■□□□□ 0.69
CHL1O00533 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHL1O00533 PFN1P12-201ENST00000455938 534 ntBASIC19.35■□□□□ 0.69
CHL1O00533 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CHL1O00533 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC19.35■□□□□ 0.69
CHL1O00533 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHL1O00533 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC19.35■□□□□ 0.69
CHL1O00533 ABBA01031663.1-201ENST00000635630 790 ntBASIC19.35■□□□□ 0.69
CHL1O00533 SLC9A7P1-201ENST00000554295 3311 ntBASIC19.35■□□□□ 0.69
CHL1O00533 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHL1O00533 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHL1O00533 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CHL1O00533 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CHL1O00533 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC19.34■□□□□ 0.69
CHL1O00533 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC19.34■□□□□ 0.69
CHL1O00533 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHL1O00533 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHL1O00533 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CHL1O00533 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CHL1O00533 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHL1O00533 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CHL1O00533 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHL1O00533 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC19.34■□□□□ 0.69
CHL1O00533 API5-203ENST00000455725 2257 ntTSL 2 BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms