Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM49D1C9J1S8 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM49D1C9J1S8 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM49D1C9J1S8 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM49D1C9J1S8 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC15.32■□□□□ 0.04
TRIM49D1C9J1S8 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
TRIM49D1C9J1S8 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TRIM49D1C9J1S8 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
TRIM49D1C9J1S8 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TRIM49D1C9J1S8 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM49D1C9J1S8 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM49D1C9J1S8 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC15.32■□□□□ 0.04
TRIM49D1C9J1S8 RPL30-202ENST00000396070 440 ntTSL 2 BASIC15.32■□□□□ 0.04
TRIM49D1C9J1S8 FABP5-202ENST00000396359 986 ntTSL 5 BASIC15.32■□□□□ 0.04
TRIM49D1C9J1S8 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC15.32■□□□□ 0.04
TRIM49D1C9J1S8 SATB1-217ENST00000493952 626 ntTSL 3 BASIC15.32■□□□□ 0.04
TRIM49D1C9J1S8 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC15.32■□□□□ 0.04
TRIM49D1C9J1S8 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC15.32■□□□□ 0.04
TRIM49D1C9J1S8 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15.32■□□□□ 0.04
TRIM49D1C9J1S8 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15.32■□□□□ 0.04
TRIM49D1C9J1S8 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM49D1C9J1S8 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
TRIM49D1C9J1S8 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
TRIM49D1C9J1S8 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC15.32■□□□□ 0.04
TRIM49D1C9J1S8 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM49D1C9J1S8 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
TRIM49D1C9J1S8 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM49D1C9J1S8 AC015802.1-201ENST00000588104 1449 ntBASIC15.32■□□□□ 0.04
TRIM49D1C9J1S8 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC15.32■□□□□ 0.04
TRIM49D1C9J1S8 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM49D1C9J1S8 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC15.32■□□□□ 0.04
TRIM49D1C9J1S8 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM49D1C9J1S8 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM49D1C9J1S8 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
TRIM49D1C9J1S8 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM49D1C9J1S8 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM49D1C9J1S8 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM49D1C9J1S8 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM49D1C9J1S8 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM49D1C9J1S8 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
TRIM49D1C9J1S8 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM49D1C9J1S8 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
TRIM49D1C9J1S8 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC15.31■□□□□ 0.04
TRIM49D1C9J1S8 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC15.31■□□□□ 0.04
TRIM49D1C9J1S8 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM49D1C9J1S8 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC15.31■□□□□ 0.04
TRIM49D1C9J1S8 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC15.31■□□□□ 0.04
TRIM49D1C9J1S8 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC15.31■□□□□ 0.04
TRIM49D1C9J1S8 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM49D1C9J1S8 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM49D1C9J1S8 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
TRIM49D1C9J1S8 C1R-201ENST00000535233 2211 ntTSL 2 BASIC15.31■□□□□ 0.04
TRIM49D1C9J1S8 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
TRIM49D1C9J1S8 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM49D1C9J1S8 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM49D1C9J1S8 RPP21-221ENST00000428040 594 ntTSL 2 BASIC15.31■□□□□ 0.04
TRIM49D1C9J1S8 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC15.31■□□□□ 0.04
TRIM49D1C9J1S8 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM49D1C9J1S8 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM49D1C9J1S8 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
TRIM49D1C9J1S8 YBX1P5-201ENST00000509441 847 ntBASIC15.31■□□□□ 0.04
TRIM49D1C9J1S8 AP000344.2-201ENST00000512987 629 ntBASIC15.31■□□□□ 0.04
TRIM49D1C9J1S8 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC15.31■□□□□ 0.04
TRIM49D1C9J1S8 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM49D1C9J1S8 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC15.31■□□□□ 0.04
TRIM49D1C9J1S8 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC15.31■□□□□ 0.04
TRIM49D1C9J1S8 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM49D1C9J1S8 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM49D1C9J1S8 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
TRIM49D1C9J1S8 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM49D1C9J1S8 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC15.31■□□□□ 0.04
TRIM49D1C9J1S8 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM49D1C9J1S8 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TRIM49D1C9J1S8 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
TRIM49D1C9J1S8 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM49D1C9J1S8 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM49D1C9J1S8 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM49D1C9J1S8 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM49D1C9J1S8 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC15.31■□□□□ 0.04
TRIM49D1C9J1S8 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC15.31■□□□□ 0.04
TRIM49D1C9J1S8 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC15.31■□□□□ 0.04
TRIM49D1C9J1S8 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM49D1C9J1S8 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM49D1C9J1S8 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM49D1C9J1S8 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM49D1C9J1S8 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM49D1C9J1S8 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC15.31■□□□□ 0.04
TRIM49D1C9J1S8 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.31■□□□□ 0.04
TRIM49D1C9J1S8 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
TRIM49D1C9J1S8 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15.31■□□□□ 0.04
TRIM49D1C9J1S8 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM49D1C9J1S8 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC15.3■□□□□ 0.04
TRIM49D1C9J1S8 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM49D1C9J1S8 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM49D1C9J1S8 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
TRIM49D1C9J1S8 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM49D1C9J1S8 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM49D1C9J1S8 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM49D1C9J1S8 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM49D1C9J1S8 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 280.4 ms