Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
PTPDC1A2A3K4 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PTPDC1A2A3K4 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PTPDC1A2A3K4 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PTPDC1A2A3K4 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PTPDC1A2A3K4 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
PTPDC1A2A3K4 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC17.92■□□□□ 0.46
PTPDC1A2A3K4 KRT43P-201ENST00000434019 910 ntBASIC17.92■□□□□ 0.46
PTPDC1A2A3K4 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC17.92■□□□□ 0.46
PTPDC1A2A3K4 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
PTPDC1A2A3K4 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PTPDC1A2A3K4 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PTPDC1A2A3K4 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC17.92■□□□□ 0.46
PTPDC1A2A3K4 ENPP7P5-201ENST00000541031 1031 ntBASIC17.92■□□□□ 0.46
PTPDC1A2A3K4 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
PTPDC1A2A3K4 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC17.92■□□□□ 0.46
PTPDC1A2A3K4 SNX29P1-201ENST00000548357 1007 ntBASIC17.92■□□□□ 0.46
PTPDC1A2A3K4 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC17.92■□□□□ 0.46
PTPDC1A2A3K4 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PTPDC1A2A3K4 NAA38-206ENST00000576384 424 ntTSL 2 BASIC17.92■□□□□ 0.46
PTPDC1A2A3K4 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC17.92■□□□□ 0.46
PTPDC1A2A3K4 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC17.92■□□□□ 0.46
PTPDC1A2A3K4 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
PTPDC1A2A3K4 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC17.92■□□□□ 0.46
PTPDC1A2A3K4 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PTPDC1A2A3K4 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PTPDC1A2A3K4 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PTPDC1A2A3K4 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC17.92■□□□□ 0.46
PTPDC1A2A3K4 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PTPDC1A2A3K4 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
PTPDC1A2A3K4 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PTPDC1A2A3K4 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC17.92■□□□□ 0.46
PTPDC1A2A3K4 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
PTPDC1A2A3K4 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC17.92■□□□□ 0.46
PTPDC1A2A3K4 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
PTPDC1A2A3K4 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PTPDC1A2A3K4 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PTPDC1A2A3K4 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
PTPDC1A2A3K4 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PTPDC1A2A3K4 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PTPDC1A2A3K4 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC17.92■□□□□ 0.46
PTPDC1A2A3K4 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PTPDC1A2A3K4 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC17.91■□□□□ 0.46
PTPDC1A2A3K4 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PTPDC1A2A3K4 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PTPDC1A2A3K4 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC17.91■□□□□ 0.46
PTPDC1A2A3K4 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC17.91■□□□□ 0.46
PTPDC1A2A3K4 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
PTPDC1A2A3K4 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PTPDC1A2A3K4 NFIC-211ENST00000641145 8399 ntBASIC17.91■□□□□ 0.46
PTPDC1A2A3K4 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
PTPDC1A2A3K4 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC17.91■□□□□ 0.46
PTPDC1A2A3K4 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
PTPDC1A2A3K4 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PTPDC1A2A3K4 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC17.91■□□□□ 0.46
PTPDC1A2A3K4 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC17.91■□□□□ 0.46
PTPDC1A2A3K4 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC17.91■□□□□ 0.46
PTPDC1A2A3K4 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC17.91■□□□□ 0.46
PTPDC1A2A3K4 GAPDHP40-201ENST00000505218 1006 ntBASIC17.91■□□□□ 0.46
PTPDC1A2A3K4 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
PTPDC1A2A3K4 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC17.91■□□□□ 0.46
PTPDC1A2A3K4 SAMD11P1-201ENST00000571429 661 ntBASIC17.91■□□□□ 0.46
PTPDC1A2A3K4 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
PTPDC1A2A3K4 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC17.91■□□□□ 0.46
PTPDC1A2A3K4 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
PTPDC1A2A3K4 MIR6775-201ENST00000617557 69 ntBASIC17.91■□□□□ 0.46
PTPDC1A2A3K4 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PTPDC1A2A3K4 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC17.91■□□□□ 0.46
PTPDC1A2A3K4 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PTPDC1A2A3K4 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PTPDC1A2A3K4 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
PTPDC1A2A3K4 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PTPDC1A2A3K4 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
PTPDC1A2A3K4 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
PTPDC1A2A3K4 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PTPDC1A2A3K4 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC17.91■□□□□ 0.46
PTPDC1A2A3K4 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC17.91■□□□□ 0.46
PTPDC1A2A3K4 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PTPDC1A2A3K4 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PTPDC1A2A3K4 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
PTPDC1A2A3K4 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC17.91■□□□□ 0.46
PTPDC1A2A3K4 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PTPDC1A2A3K4 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC17.91■□□□□ 0.46
PTPDC1A2A3K4 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC17.9■□□□□ 0.46
PTPDC1A2A3K4 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PTPDC1A2A3K4 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PTPDC1A2A3K4 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC17.9■□□□□ 0.46
PTPDC1A2A3K4 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PTPDC1A2A3K4 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
PTPDC1A2A3K4 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PTPDC1A2A3K4 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PTPDC1A2A3K4 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
PTPDC1A2A3K4 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PTPDC1A2A3K4 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PTPDC1A2A3K4 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
PTPDC1A2A3K4 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
PTPDC1A2A3K4 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PTPDC1A2A3K4 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PTPDC1A2A3K4 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PTPDC1A2A3K4 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms