Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHB1Q9Y5F3 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHB1Q9Y5F3 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
PCDHB1Q9Y5F3 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHB1Q9Y5F3 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.26■□□□□ 0.03
PCDHB1Q9Y5F3 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
PCDHB1Q9Y5F3 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHB1Q9Y5F3 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHB1Q9Y5F3 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHB1Q9Y5F3 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHB1Q9Y5F3 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHB1Q9Y5F3 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHB1Q9Y5F3 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHB1Q9Y5F3 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC15.26■□□□□ 0.03
PCDHB1Q9Y5F3 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC15.26■□□□□ 0.03
PCDHB1Q9Y5F3 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC15.26■□□□□ 0.03
PCDHB1Q9Y5F3 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC15.26■□□□□ 0.03
PCDHB1Q9Y5F3 CSF2RBP1-201ENST00000447905 391 ntBASIC15.26■□□□□ 0.03
PCDHB1Q9Y5F3 GAPDHP40-201ENST00000505218 1006 ntBASIC15.26■□□□□ 0.03
PCDHB1Q9Y5F3 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC15.26■□□□□ 0.03
PCDHB1Q9Y5F3 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
PCDHB1Q9Y5F3 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC15.26■□□□□ 0.03
PCDHB1Q9Y5F3 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.26■□□□□ 0.03
PCDHB1Q9Y5F3 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC15.26■□□□□ 0.03
PCDHB1Q9Y5F3 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC15.26■□□□□ 0.03
PCDHB1Q9Y5F3 SAMD11P1-201ENST00000571429 661 ntBASIC15.26■□□□□ 0.03
PCDHB1Q9Y5F3 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHB1Q9Y5F3 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15.26■□□□□ 0.03
PCDHB1Q9Y5F3 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC15.26■□□□□ 0.03
PCDHB1Q9Y5F3 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC15.26■□□□□ 0.03
PCDHB1Q9Y5F3 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.26■□□□□ 0.03
PCDHB1Q9Y5F3 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
PCDHB1Q9Y5F3 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHB1Q9Y5F3 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHB1Q9Y5F3 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
PCDHB1Q9Y5F3 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHB1Q9Y5F3 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.26■□□□□ 0.03
PCDHB1Q9Y5F3 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
PCDHB1Q9Y5F3 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC15.26■□□□□ 0.03
PCDHB1Q9Y5F3 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHB1Q9Y5F3 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHB1Q9Y5F3 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.25■□□□□ 0.03
PCDHB1Q9Y5F3 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHB1Q9Y5F3 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHB1Q9Y5F3 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHB1Q9Y5F3 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHB1Q9Y5F3 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHB1Q9Y5F3 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHB1Q9Y5F3 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHB1Q9Y5F3 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.25■□□□□ 0.03
PCDHB1Q9Y5F3 TUBB1P2-201ENST00000422712 1306 ntBASIC15.25■□□□□ 0.03
PCDHB1Q9Y5F3 TUBB1P1-201ENST00000503144 1300 ntBASIC15.25■□□□□ 0.03
PCDHB1Q9Y5F3 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHB1Q9Y5F3 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHB1Q9Y5F3 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
PCDHB1Q9Y5F3 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHB1Q9Y5F3 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHB1Q9Y5F3 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC15.25■□□□□ 0.03
PCDHB1Q9Y5F3 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC15.25■□□□□ 0.03
PCDHB1Q9Y5F3 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHB1Q9Y5F3 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.25■□□□□ 0.03
PCDHB1Q9Y5F3 ACTG1P3-201ENST00000431775 1114 ntBASIC15.25■□□□□ 0.03
PCDHB1Q9Y5F3 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC15.25■□□□□ 0.03
PCDHB1Q9Y5F3 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHB1Q9Y5F3 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC15.25■□□□□ 0.03
PCDHB1Q9Y5F3 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC15.25■□□□□ 0.03
PCDHB1Q9Y5F3 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC15.25■□□□□ 0.03
PCDHB1Q9Y5F3 CD74-212ENST00000524315 584 ntTSL 5 BASIC15.25■□□□□ 0.03
PCDHB1Q9Y5F3 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHB1Q9Y5F3 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.25■□□□□ 0.03
PCDHB1Q9Y5F3 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
PCDHB1Q9Y5F3 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC15.25■□□□□ 0.03
PCDHB1Q9Y5F3 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC15.25■□□□□ 0.03
PCDHB1Q9Y5F3 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC15.25■□□□□ 0.03
PCDHB1Q9Y5F3 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC15.25■□□□□ 0.03
PCDHB1Q9Y5F3 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
PCDHB1Q9Y5F3 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.25■□□□□ 0.03
PCDHB1Q9Y5F3 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.25■□□□□ 0.03
PCDHB1Q9Y5F3 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHB1Q9Y5F3 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
PCDHB1Q9Y5F3 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHB1Q9Y5F3 TNRC18P2-201ENST00000417666 2714 ntBASIC15.25■□□□□ 0.03
PCDHB1Q9Y5F3 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
PCDHB1Q9Y5F3 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
PCDHB1Q9Y5F3 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHB1Q9Y5F3 REXO1L4P-201ENST00000605109 1937 ntBASIC15.25■□□□□ 0.03
PCDHB1Q9Y5F3 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHB1Q9Y5F3 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.25■□□□□ 0.03
PCDHB1Q9Y5F3 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHB1Q9Y5F3 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
PCDHB1Q9Y5F3 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHB1Q9Y5F3 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
PCDHB1Q9Y5F3 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.25■□□□□ 0.03
PCDHB1Q9Y5F3 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHB1Q9Y5F3 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHB1Q9Y5F3 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHB1Q9Y5F3 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.24■□□□□ 0.03
PCDHB1Q9Y5F3 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHB1Q9Y5F3 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHB1Q9Y5F3 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms