Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
R3HCC1Q9Y3T6 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
R3HCC1Q9Y3T6 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
R3HCC1Q9Y3T6 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
R3HCC1Q9Y3T6 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
R3HCC1Q9Y3T6 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
R3HCC1Q9Y3T6 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
R3HCC1Q9Y3T6 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
R3HCC1Q9Y3T6 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
R3HCC1Q9Y3T6 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
R3HCC1Q9Y3T6 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
R3HCC1Q9Y3T6 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC17.59■□□□□ 0.41
R3HCC1Q9Y3T6 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
R3HCC1Q9Y3T6 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
R3HCC1Q9Y3T6 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
R3HCC1Q9Y3T6 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
R3HCC1Q9Y3T6 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC17.59■□□□□ 0.41
R3HCC1Q9Y3T6 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
R3HCC1Q9Y3T6 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
R3HCC1Q9Y3T6 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
R3HCC1Q9Y3T6 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
R3HCC1Q9Y3T6 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC17.59■□□□□ 0.41
R3HCC1Q9Y3T6 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.59■□□□□ 0.41
R3HCC1Q9Y3T6 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.59■□□□□ 0.41
R3HCC1Q9Y3T6 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
R3HCC1Q9Y3T6 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
R3HCC1Q9Y3T6 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC17.59■□□□□ 0.41
R3HCC1Q9Y3T6 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
R3HCC1Q9Y3T6 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.59■□□□□ 0.41
R3HCC1Q9Y3T6 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.59■□□□□ 0.41
R3HCC1Q9Y3T6 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
R3HCC1Q9Y3T6 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
R3HCC1Q9Y3T6 PNMT-202ENST00000394246 821 ntTSL 2 BASIC17.59■□□□□ 0.41
R3HCC1Q9Y3T6 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
R3HCC1Q9Y3T6 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC17.59■□□□□ 0.41
R3HCC1Q9Y3T6 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
R3HCC1Q9Y3T6 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC17.59■□□□□ 0.41
R3HCC1Q9Y3T6 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC17.59■□□□□ 0.41
R3HCC1Q9Y3T6 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
R3HCC1Q9Y3T6 AC067863.1-201ENST00000494933 530 ntBASIC17.59■□□□□ 0.41
R3HCC1Q9Y3T6 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.59■□□□□ 0.41
R3HCC1Q9Y3T6 MAX-210ENST00000555419 765 ntTSL 5 BASIC17.59■□□□□ 0.41
R3HCC1Q9Y3T6 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.59■□□□□ 0.41
R3HCC1Q9Y3T6 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC17.59■□□□□ 0.41
R3HCC1Q9Y3T6 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
R3HCC1Q9Y3T6 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC17.59■□□□□ 0.41
R3HCC1Q9Y3T6 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.59■□□□□ 0.41
R3HCC1Q9Y3T6 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
R3HCC1Q9Y3T6 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
R3HCC1Q9Y3T6 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
R3HCC1Q9Y3T6 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
R3HCC1Q9Y3T6 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC17.59■□□□□ 0.41
R3HCC1Q9Y3T6 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
R3HCC1Q9Y3T6 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
R3HCC1Q9Y3T6 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
R3HCC1Q9Y3T6 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
R3HCC1Q9Y3T6 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
R3HCC1Q9Y3T6 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
R3HCC1Q9Y3T6 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC17.58■□□□□ 0.41
R3HCC1Q9Y3T6 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
R3HCC1Q9Y3T6 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
R3HCC1Q9Y3T6 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
R3HCC1Q9Y3T6 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
R3HCC1Q9Y3T6 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
R3HCC1Q9Y3T6 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
R3HCC1Q9Y3T6 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
R3HCC1Q9Y3T6 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.41
R3HCC1Q9Y3T6 KRT8P44-201ENST00000441609 1350 ntBASIC17.58■□□□□ 0.4
R3HCC1Q9Y3T6 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
R3HCC1Q9Y3T6 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC17.58■□□□□ 0.4
R3HCC1Q9Y3T6 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
R3HCC1Q9Y3T6 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
R3HCC1Q9Y3T6 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
R3HCC1Q9Y3T6 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC17.58■□□□□ 0.4
R3HCC1Q9Y3T6 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC17.58■□□□□ 0.4
R3HCC1Q9Y3T6 PMS2P2-201ENST00000425039 1128 ntBASIC17.58■□□□□ 0.4
R3HCC1Q9Y3T6 AL645939.2-201ENST00000427340 991 ntBASIC17.58■□□□□ 0.4
R3HCC1Q9Y3T6 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.58■□□□□ 0.4
R3HCC1Q9Y3T6 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
R3HCC1Q9Y3T6 AC018529.1-201ENST00000613063 361 ntBASIC17.58■□□□□ 0.4
R3HCC1Q9Y3T6 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
R3HCC1Q9Y3T6 AC093028.1-201ENST00000622998 982 ntBASIC17.58■□□□□ 0.4
R3HCC1Q9Y3T6 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
R3HCC1Q9Y3T6 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
R3HCC1Q9Y3T6 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
R3HCC1Q9Y3T6 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC17.58■□□□□ 0.4
R3HCC1Q9Y3T6 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
R3HCC1Q9Y3T6 HAL-202ENST00000538703 2637 ntTSL 2 BASIC17.58■□□□□ 0.4
R3HCC1Q9Y3T6 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC17.58■□□□□ 0.4
R3HCC1Q9Y3T6 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
R3HCC1Q9Y3T6 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC17.58■□□□□ 0.4
R3HCC1Q9Y3T6 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
R3HCC1Q9Y3T6 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
R3HCC1Q9Y3T6 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
R3HCC1Q9Y3T6 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC17.58■□□□□ 0.4
R3HCC1Q9Y3T6 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
R3HCC1Q9Y3T6 AC067750.1-201ENST00000608826 6545 ntBASIC17.57■□□□□ 0.4
R3HCC1Q9Y3T6 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC17.57■□□□□ 0.4
R3HCC1Q9Y3T6 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
R3HCC1Q9Y3T6 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms