Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SATB2Q9UPW6 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC15.03■□□□□ -0
SATB2Q9UPW6 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC15.03■□□□□ -0
SATB2Q9UPW6 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SATB2Q9UPW6 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SATB2Q9UPW6 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC15.03■□□□□ -0
SATB2Q9UPW6 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.03■□□□□ -0
SATB2Q9UPW6 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC15.03■□□□□ -0
SATB2Q9UPW6 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SATB2Q9UPW6 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
SATB2Q9UPW6 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
SATB2Q9UPW6 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.03■□□□□ -0
SATB2Q9UPW6 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC15.03■□□□□ -0
SATB2Q9UPW6 AC026954.1-201ENST00000429771 1293 ntBASIC15.03■□□□□ -0
SATB2Q9UPW6 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC15.03■□□□□ -0
SATB2Q9UPW6 RPL13AP20-201ENST00000459725 609 ntBASIC15.03■□□□□ -0
SATB2Q9UPW6 TPI1-206ENST00000488464 791 ntTSL 5 BASIC15.03■□□□□ -0
SATB2Q9UPW6 EMC4-209ENST00000559421 497 ntTSL 2 BASIC15.03■□□□□ -0
SATB2Q9UPW6 IGHV3OR16-16-201ENST00000563644 343 ntBASIC15.03■□□□□ -0
SATB2Q9UPW6 AP001063.1-201ENST00000568332 529 ntBASIC15.03■□□□□ -0
SATB2Q9UPW6 MIR3615-201ENST00000581999 87 ntBASIC15.03■□□□□ -0
SATB2Q9UPW6 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC15.03■□□□□ -0
SATB2Q9UPW6 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
SATB2Q9UPW6 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC15.03■□□□□ -0
SATB2Q9UPW6 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SATB2Q9UPW6 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.03■□□□□ -0
SATB2Q9UPW6 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
SATB2Q9UPW6 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.03■□□□□ -0
SATB2Q9UPW6 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
SATB2Q9UPW6 AP005117.1-202ENST00000581724 1908 ntBASIC15.03■□□□□ -0
SATB2Q9UPW6 AC011477.6-201ENST00000604980 1927 ntBASIC15.03■□□□□ -0
SATB2Q9UPW6 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SATB2Q9UPW6 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SATB2Q9UPW6 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
SATB2Q9UPW6 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.03■□□□□ -0
SATB2Q9UPW6 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.03■□□□□ -0
SATB2Q9UPW6 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.03■□□□□ -0
SATB2Q9UPW6 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SATB2Q9UPW6 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SATB2Q9UPW6 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC15.02■□□□□ -0
SATB2Q9UPW6 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC15.02■□□□□ -0
SATB2Q9UPW6 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.02■□□□□ -0
SATB2Q9UPW6 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
SATB2Q9UPW6 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
SATB2Q9UPW6 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.02■□□□□ -0
SATB2Q9UPW6 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC15.02■□□□□ -0
SATB2Q9UPW6 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
SATB2Q9UPW6 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
SATB2Q9UPW6 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC15.02■□□□□ -0
SATB2Q9UPW6 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SATB2Q9UPW6 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
SATB2Q9UPW6 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SATB2Q9UPW6 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SATB2Q9UPW6 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SATB2Q9UPW6 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC15.02■□□□□ -0
SATB2Q9UPW6 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
SATB2Q9UPW6 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC15.02■□□□□ -0
SATB2Q9UPW6 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC15.02■□□□□ -0
SATB2Q9UPW6 MIR1247-201ENST00000408206 136 ntBASIC15.02■□□□□ -0
SATB2Q9UPW6 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC15.02■□□□□ -0
SATB2Q9UPW6 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC15.02■□□□□ -0
SATB2Q9UPW6 AC093433.1-201ENST00000458048 571 ntBASIC15.02■□□□□ -0
SATB2Q9UPW6 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
SATB2Q9UPW6 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
SATB2Q9UPW6 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC15.02■□□□□ -0
SATB2Q9UPW6 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC15.02■□□□□ -0
SATB2Q9UPW6 RN7SL560P-201ENST00000577943 264 ntBASIC15.02■□□□□ -0
SATB2Q9UPW6 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC15.02■□□□□ -0
SATB2Q9UPW6 AC005252.2-201ENST00000624630 1141 ntBASIC15.02■□□□□ -0
SATB2Q9UPW6 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.02□□□□□ -0.01
SATB2Q9UPW6 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
SATB2Q9UPW6 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SATB2Q9UPW6 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
SATB2Q9UPW6 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.02□□□□□ -0.01
SATB2Q9UPW6 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
SATB2Q9UPW6 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.02□□□□□ -0.01
SATB2Q9UPW6 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SATB2Q9UPW6 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SATB2Q9UPW6 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SATB2Q9UPW6 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.02□□□□□ -0.01
SATB2Q9UPW6 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SATB2Q9UPW6 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.02□□□□□ -0.01
SATB2Q9UPW6 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SATB2Q9UPW6 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SATB2Q9UPW6 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SATB2Q9UPW6 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SATB2Q9UPW6 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SATB2Q9UPW6 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SATB2Q9UPW6 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
SATB2Q9UPW6 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SATB2Q9UPW6 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.01□□□□□ -0.01
SATB2Q9UPW6 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SATB2Q9UPW6 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SATB2Q9UPW6 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
SATB2Q9UPW6 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC15.01□□□□□ -0.01
SATB2Q9UPW6 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC15.01□□□□□ -0.01
SATB2Q9UPW6 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SATB2Q9UPW6 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SATB2Q9UPW6 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SATB2Q9UPW6 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms