Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.86■□□□□ 0.29
PDLIM7Q9NR12 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDLIM7Q9NR12 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDLIM7Q9NR12 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDLIM7Q9NR12 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDLIM7Q9NR12 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDLIM7Q9NR12 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PDLIM7Q9NR12 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
PDLIM7Q9NR12 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PDLIM7Q9NR12 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC16.86■□□□□ 0.29
PDLIM7Q9NR12 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
PDLIM7Q9NR12 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PDLIM7Q9NR12 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDLIM7Q9NR12 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDLIM7Q9NR12 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
PDLIM7Q9NR12 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PDLIM7Q9NR12 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC16.86■□□□□ 0.29
PDLIM7Q9NR12 POM121L8P-201ENST00000417732 1281 ntBASIC16.86■□□□□ 0.29
PDLIM7Q9NR12 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC16.86■□□□□ 0.29
PDLIM7Q9NR12 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC16.86■□□□□ 0.29
PDLIM7Q9NR12 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDLIM7Q9NR12 POM121L9P-203ENST00000441984 1285 ntBASIC16.86■□□□□ 0.29
PDLIM7Q9NR12 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC16.86■□□□□ 0.29
PDLIM7Q9NR12 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC16.86■□□□□ 0.29
PDLIM7Q9NR12 AC106794.1-201ENST00000506935 792 ntBASIC16.86■□□□□ 0.29
PDLIM7Q9NR12 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC16.86■□□□□ 0.29
PDLIM7Q9NR12 EID1-202ENST00000560490 584 ntTSL 3 BASIC16.86■□□□□ 0.29
PDLIM7Q9NR12 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC16.86■□□□□ 0.29
PDLIM7Q9NR12 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
PDLIM7Q9NR12 CENPX-208ENST00000584347 799 ntTSL 2 BASIC16.86■□□□□ 0.29
PDLIM7Q9NR12 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.86■□□□□ 0.29
PDLIM7Q9NR12 HLA-C-210ENST00000640219 976 ntBASIC16.86■□□□□ 0.29
PDLIM7Q9NR12 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PDLIM7Q9NR12 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PDLIM7Q9NR12 AC073347.1-201ENST00000421633 2643 ntBASIC16.86■□□□□ 0.29
PDLIM7Q9NR12 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
PDLIM7Q9NR12 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDLIM7Q9NR12 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
PDLIM7Q9NR12 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDLIM7Q9NR12 AC092384.3-202ENST00000564646 2873 ntBASIC16.86■□□□□ 0.29
PDLIM7Q9NR12 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDLIM7Q9NR12 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDLIM7Q9NR12 CELP-203ENST00000624767 2414 ntTSL 5 BASIC16.86■□□□□ 0.29
PDLIM7Q9NR12 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
PDLIM7Q9NR12 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDLIM7Q9NR12 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDLIM7Q9NR12 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.86■□□□□ 0.29
PDLIM7Q9NR12 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC16.86■□□□□ 0.29
PDLIM7Q9NR12 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PDLIM7Q9NR12 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDLIM7Q9NR12 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDLIM7Q9NR12 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.85■□□□□ 0.29
PDLIM7Q9NR12 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PDLIM7Q9NR12 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.85■□□□□ 0.29
PDLIM7Q9NR12 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
PDLIM7Q9NR12 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.85■□□□□ 0.29
PDLIM7Q9NR12 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PDLIM7Q9NR12 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC16.85■□□□□ 0.29
PDLIM7Q9NR12 SLC16A6P1-201ENST00000413214 1059 ntBASIC16.85■□□□□ 0.29
PDLIM7Q9NR12 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC16.85■□□□□ 0.29
PDLIM7Q9NR12 CMC1-204ENST00000423894 549 ntTSL 2 BASIC16.85■□□□□ 0.29
PDLIM7Q9NR12 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC16.85■□□□□ 0.29
PDLIM7Q9NR12 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC16.85■□□□□ 0.29
PDLIM7Q9NR12 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC16.85■□□□□ 0.29
PDLIM7Q9NR12 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC16.85■□□□□ 0.29
PDLIM7Q9NR12 BNIP3P13-201ENST00000599968 566 ntBASIC16.85■□□□□ 0.29
PDLIM7Q9NR12 AC073352.2-201ENST00000609385 439 ntBASIC16.85■□□□□ 0.29
PDLIM7Q9NR12 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC16.85■□□□□ 0.29
PDLIM7Q9NR12 AL805961.1-203ENST00000641078 1258 ntBASIC16.85■□□□□ 0.29
PDLIM7Q9NR12 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
PDLIM7Q9NR12 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDLIM7Q9NR12 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDLIM7Q9NR12 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
PDLIM7Q9NR12 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
PDLIM7Q9NR12 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDLIM7Q9NR12 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDLIM7Q9NR12 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDLIM7Q9NR12 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PDLIM7Q9NR12 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PDLIM7Q9NR12 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PDLIM7Q9NR12 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDLIM7Q9NR12 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDLIM7Q9NR12 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
PDLIM7Q9NR12 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDLIM7Q9NR12 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC16.85■□□□□ 0.29
PDLIM7Q9NR12 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
PDLIM7Q9NR12 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PDLIM7Q9NR12 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PDLIM7Q9NR12 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDLIM7Q9NR12 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDLIM7Q9NR12 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDLIM7Q9NR12 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDLIM7Q9NR12 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDLIM7Q9NR12 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
PDLIM7Q9NR12 REXO1L2P-201ENST00000425429 2069 ntBASIC16.84■□□□□ 0.29
PDLIM7Q9NR12 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC16.84■□□□□ 0.29
PDLIM7Q9NR12 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDLIM7Q9NR12 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDLIM7Q9NR12 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDLIM7Q9NR12 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms