Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
POLR2J3Q9H1A7 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
POLR2J3Q9H1A7 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
POLR2J3Q9H1A7 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
POLR2J3Q9H1A7 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC14.16□□□□□ -0.14
POLR2J3Q9H1A7 CNN2P11-201ENST00000429351 262 ntBASIC14.16□□□□□ -0.14
POLR2J3Q9H1A7 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
POLR2J3Q9H1A7 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
POLR2J3Q9H1A7 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC14.16□□□□□ -0.14
POLR2J3Q9H1A7 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
POLR2J3Q9H1A7 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
POLR2J3Q9H1A7 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.16□□□□□ -0.14
POLR2J3Q9H1A7 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.16□□□□□ -0.14
POLR2J3Q9H1A7 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.16□□□□□ -0.14
POLR2J3Q9H1A7 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
POLR2J3Q9H1A7 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
POLR2J3Q9H1A7 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
POLR2J3Q9H1A7 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
POLR2J3Q9H1A7 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC14.16□□□□□ -0.14
POLR2J3Q9H1A7 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
POLR2J3Q9H1A7 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
POLR2J3Q9H1A7 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
POLR2J3Q9H1A7 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
POLR2J3Q9H1A7 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
POLR2J3Q9H1A7 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
POLR2J3Q9H1A7 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
POLR2J3Q9H1A7 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
POLR2J3Q9H1A7 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
POLR2J3Q9H1A7 AL121723.1-201ENST00000445194 1519 ntBASIC14.15□□□□□ -0.14
POLR2J3Q9H1A7 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.15□□□□□ -0.14
POLR2J3Q9H1A7 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
POLR2J3Q9H1A7 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
POLR2J3Q9H1A7 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
POLR2J3Q9H1A7 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
POLR2J3Q9H1A7 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
POLR2J3Q9H1A7 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
POLR2J3Q9H1A7 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
POLR2J3Q9H1A7 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
POLR2J3Q9H1A7 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
POLR2J3Q9H1A7 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
POLR2J3Q9H1A7 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
POLR2J3Q9H1A7 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
POLR2J3Q9H1A7 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
POLR2J3Q9H1A7 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
POLR2J3Q9H1A7 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
POLR2J3Q9H1A7 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
POLR2J3Q9H1A7 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
POLR2J3Q9H1A7 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
POLR2J3Q9H1A7 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
POLR2J3Q9H1A7 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
POLR2J3Q9H1A7 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.15□□□□□ -0.14
POLR2J3Q9H1A7 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
POLR2J3Q9H1A7 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
POLR2J3Q9H1A7 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
POLR2J3Q9H1A7 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
POLR2J3Q9H1A7 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
POLR2J3Q9H1A7 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
POLR2J3Q9H1A7 CNN2P2-201ENST00000443536 909 ntBASIC14.15□□□□□ -0.14
POLR2J3Q9H1A7 CNN2P3-201ENST00000450201 906 ntBASIC14.15□□□□□ -0.14
POLR2J3Q9H1A7 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC14.15□□□□□ -0.14
POLR2J3Q9H1A7 HLA-J-203ENST00000494367 1087 ntBASIC14.15□□□□□ -0.14
POLR2J3Q9H1A7 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC14.15□□□□□ -0.14
POLR2J3Q9H1A7 ZNF890P-202ENST00000530367 1156 ntBASIC14.15□□□□□ -0.14
POLR2J3Q9H1A7 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
POLR2J3Q9H1A7 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
POLR2J3Q9H1A7 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.15□□□□□ -0.14
POLR2J3Q9H1A7 AC000095.1-201ENST00000603208 874 ntBASIC14.15□□□□□ -0.14
POLR2J3Q9H1A7 TEX28P1-201ENST00000613479 1221 ntBASIC14.15□□□□□ -0.14
POLR2J3Q9H1A7 TEX28P2-201ENST00000617764 1221 ntBASIC14.15□□□□□ -0.14
POLR2J3Q9H1A7 AL136317.3-201ENST00000618497 906 ntBASIC14.15□□□□□ -0.14
POLR2J3Q9H1A7 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.15□□□□□ -0.14
POLR2J3Q9H1A7 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.15□□□□□ -0.14
POLR2J3Q9H1A7 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.15□□□□□ -0.14
POLR2J3Q9H1A7 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
POLR2J3Q9H1A7 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.15□□□□□ -0.14
POLR2J3Q9H1A7 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
POLR2J3Q9H1A7 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
POLR2J3Q9H1A7 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
POLR2J3Q9H1A7 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.15□□□□□ -0.14
POLR2J3Q9H1A7 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.15□□□□□ -0.14
POLR2J3Q9H1A7 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
POLR2J3Q9H1A7 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
POLR2J3Q9H1A7 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
POLR2J3Q9H1A7 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
POLR2J3Q9H1A7 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
POLR2J3Q9H1A7 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.15□□□□□ -0.14
POLR2J3Q9H1A7 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
POLR2J3Q9H1A7 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
POLR2J3Q9H1A7 MTHFR-210ENST00000641407 2387 ntBASIC14.15□□□□□ -0.14
POLR2J3Q9H1A7 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
POLR2J3Q9H1A7 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
POLR2J3Q9H1A7 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
POLR2J3Q9H1A7 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
POLR2J3Q9H1A7 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
POLR2J3Q9H1A7 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
POLR2J3Q9H1A7 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.14□□□□□ -0.15
POLR2J3Q9H1A7 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
POLR2J3Q9H1A7 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
POLR2J3Q9H1A7 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
POLR2J3Q9H1A7 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms