Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
YIPF4Q9BSR8 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
YIPF4Q9BSR8 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.44□□□□□ -0.1
YIPF4Q9BSR8 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.43□□□□□ -0.1
YIPF4Q9BSR8 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
YIPF4Q9BSR8 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
YIPF4Q9BSR8 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.43□□□□□ -0.1
YIPF4Q9BSR8 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
YIPF4Q9BSR8 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
YIPF4Q9BSR8 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
YIPF4Q9BSR8 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
YIPF4Q9BSR8 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
YIPF4Q9BSR8 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.43□□□□□ -0.1
YIPF4Q9BSR8 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
YIPF4Q9BSR8 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.43□□□□□ -0.1
YIPF4Q9BSR8 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
YIPF4Q9BSR8 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.43□□□□□ -0.1
YIPF4Q9BSR8 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
YIPF4Q9BSR8 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
YIPF4Q9BSR8 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
YIPF4Q9BSR8 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
YIPF4Q9BSR8 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.43□□□□□ -0.1
YIPF4Q9BSR8 GOLGA6L11P-201ENST00000417252 1298 ntBASIC14.43□□□□□ -0.1
YIPF4Q9BSR8 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.43□□□□□ -0.1
YIPF4Q9BSR8 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.43□□□□□ -0.1
YIPF4Q9BSR8 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
YIPF4Q9BSR8 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.43□□□□□ -0.1
YIPF4Q9BSR8 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.43□□□□□ -0.1
YIPF4Q9BSR8 AC009118.2-201ENST00000613275 655 ntBASIC14.43□□□□□ -0.1
YIPF4Q9BSR8 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC14.43□□□□□ -0.1
YIPF4Q9BSR8 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
YIPF4Q9BSR8 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
YIPF4Q9BSR8 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
YIPF4Q9BSR8 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
YIPF4Q9BSR8 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
YIPF4Q9BSR8 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.43□□□□□ -0.1
YIPF4Q9BSR8 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.43□□□□□ -0.1
YIPF4Q9BSR8 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
YIPF4Q9BSR8 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
YIPF4Q9BSR8 WASH3P-207ENST00000560956 1394 ntBASIC14.43□□□□□ -0.1
YIPF4Q9BSR8 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.43□□□□□ -0.1
YIPF4Q9BSR8 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
YIPF4Q9BSR8 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
YIPF4Q9BSR8 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
YIPF4Q9BSR8 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
YIPF4Q9BSR8 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.43□□□□□ -0.1
YIPF4Q9BSR8 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
YIPF4Q9BSR8 AC015656.1-201ENST00000624209 3578 ntBASIC14.43□□□□□ -0.1
YIPF4Q9BSR8 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
YIPF4Q9BSR8 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
YIPF4Q9BSR8 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
YIPF4Q9BSR8 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
YIPF4Q9BSR8 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
YIPF4Q9BSR8 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
YIPF4Q9BSR8 SBF1P1-201ENST00000444527 5631 ntBASIC14.43□□□□□ -0.1
YIPF4Q9BSR8 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
YIPF4Q9BSR8 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.42□□□□□ -0.1
YIPF4Q9BSR8 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
YIPF4Q9BSR8 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.42□□□□□ -0.1
YIPF4Q9BSR8 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
YIPF4Q9BSR8 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
YIPF4Q9BSR8 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.42□□□□□ -0.1
YIPF4Q9BSR8 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
YIPF4Q9BSR8 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
YIPF4Q9BSR8 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
YIPF4Q9BSR8 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
YIPF4Q9BSR8 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
YIPF4Q9BSR8 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
YIPF4Q9BSR8 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.42□□□□□ -0.1
YIPF4Q9BSR8 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.42□□□□□ -0.1
YIPF4Q9BSR8 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
YIPF4Q9BSR8 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
YIPF4Q9BSR8 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
YIPF4Q9BSR8 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
YIPF4Q9BSR8 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.42□□□□□ -0.1
YIPF4Q9BSR8 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.42□□□□□ -0.1
YIPF4Q9BSR8 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.42□□□□□ -0.1
YIPF4Q9BSR8 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.42□□□□□ -0.1
YIPF4Q9BSR8 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.42□□□□□ -0.1
YIPF4Q9BSR8 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
YIPF4Q9BSR8 MEIS3P1-201ENST00000495167 958 ntBASIC14.42□□□□□ -0.1
YIPF4Q9BSR8 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
YIPF4Q9BSR8 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.42□□□□□ -0.1
YIPF4Q9BSR8 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.42□□□□□ -0.1
YIPF4Q9BSR8 AC104794.3-201ENST00000566840 1248 ntBASIC14.42□□□□□ -0.1
YIPF4Q9BSR8 AC092337.1-201ENST00000568699 1129 ntBASIC14.42□□□□□ -0.1
YIPF4Q9BSR8 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.42□□□□□ -0.1
YIPF4Q9BSR8 SRD5A3P1-201ENST00000603021 949 ntBASIC14.42□□□□□ -0.1
YIPF4Q9BSR8 AC004233.3-201ENST00000607794 1269 ntBASIC14.42□□□□□ -0.1
YIPF4Q9BSR8 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.42□□□□□ -0.1
YIPF4Q9BSR8 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC14.42□□□□□ -0.1
YIPF4Q9BSR8 AL158212.4-201ENST00000624062 1286 ntBASIC14.42□□□□□ -0.1
YIPF4Q9BSR8 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
YIPF4Q9BSR8 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
YIPF4Q9BSR8 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
YIPF4Q9BSR8 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
YIPF4Q9BSR8 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
YIPF4Q9BSR8 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
YIPF4Q9BSR8 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
YIPF4Q9BSR8 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms