Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PCGF1Q9BSM1 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PCGF1Q9BSM1 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC12.88□□□□□ -0.35
PCGF1Q9BSM1 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC12.88□□□□□ -0.35
PCGF1Q9BSM1 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PCGF1Q9BSM1 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
PCGF1Q9BSM1 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
PCGF1Q9BSM1 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PCGF1Q9BSM1 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
PCGF1Q9BSM1 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
PCGF1Q9BSM1 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PCGF1Q9BSM1 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
PCGF1Q9BSM1 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
PCGF1Q9BSM1 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
PCGF1Q9BSM1 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PCGF1Q9BSM1 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
PCGF1Q9BSM1 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PCGF1Q9BSM1 GK-202ENST00000378941 458 ntTSL 3 BASIC12.88□□□□□ -0.35
PCGF1Q9BSM1 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PCGF1Q9BSM1 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
PCGF1Q9BSM1 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
PCGF1Q9BSM1 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
PCGF1Q9BSM1 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC12.88□□□□□ -0.35
PCGF1Q9BSM1 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PCGF1Q9BSM1 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC12.88□□□□□ -0.35
PCGF1Q9BSM1 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PCGF1Q9BSM1 RHOA-206ENST00000454011 889 ntTSL 2 BASIC12.88□□□□□ -0.35
PCGF1Q9BSM1 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC12.88□□□□□ -0.35
PCGF1Q9BSM1 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC12.88□□□□□ -0.35
PCGF1Q9BSM1 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC12.88□□□□□ -0.35
PCGF1Q9BSM1 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC12.88□□□□□ -0.35
PCGF1Q9BSM1 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC12.88□□□□□ -0.35
PCGF1Q9BSM1 FAM86LP-201ENST00000478302 853 ntBASIC12.88□□□□□ -0.35
PCGF1Q9BSM1 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC12.88□□□□□ -0.35
PCGF1Q9BSM1 NEU3-203ENST00000529024 581 ntTSL 3 BASIC12.88□□□□□ -0.35
PCGF1Q9BSM1 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
PCGF1Q9BSM1 AC132938.2-201ENST00000579188 680 ntBASIC12.88□□□□□ -0.35
PCGF1Q9BSM1 PIGL-212ENST00000581006 554 ntTSL 4 BASIC12.88□□□□□ -0.35
PCGF1Q9BSM1 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC12.88□□□□□ -0.35
PCGF1Q9BSM1 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC12.88□□□□□ -0.35
PCGF1Q9BSM1 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC12.88□□□□□ -0.35
PCGF1Q9BSM1 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
PCGF1Q9BSM1 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
PCGF1Q9BSM1 AL591163.1-201ENST00000641757 987 ntBASIC12.88□□□□□ -0.35
PCGF1Q9BSM1 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
PCGF1Q9BSM1 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
PCGF1Q9BSM1 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC12.88□□□□□ -0.35
PCGF1Q9BSM1 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PCGF1Q9BSM1 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PCGF1Q9BSM1 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
PCGF1Q9BSM1 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PCGF1Q9BSM1 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC12.88□□□□□ -0.35
PCGF1Q9BSM1 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PCGF1Q9BSM1 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PCGF1Q9BSM1 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC12.88□□□□□ -0.35
PCGF1Q9BSM1 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
PCGF1Q9BSM1 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
PCGF1Q9BSM1 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PCGF1Q9BSM1 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
PCGF1Q9BSM1 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PCGF1Q9BSM1 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC12.88□□□□□ -0.35
PCGF1Q9BSM1 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
PCGF1Q9BSM1 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
PCGF1Q9BSM1 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
PCGF1Q9BSM1 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC12.88□□□□□ -0.35
PCGF1Q9BSM1 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC12.87□□□□□ -0.35
PCGF1Q9BSM1 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
PCGF1Q9BSM1 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
PCGF1Q9BSM1 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC12.87□□□□□ -0.35
PCGF1Q9BSM1 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
PCGF1Q9BSM1 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
PCGF1Q9BSM1 ILF3-AS1-201ENST00000591501 1983 ntBASIC12.87□□□□□ -0.35
PCGF1Q9BSM1 POLL-217ENST00000628479 1953 ntTSL 5 BASIC12.87□□□□□ -0.35
PCGF1Q9BSM1 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
PCGF1Q9BSM1 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
PCGF1Q9BSM1 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC12.87□□□□□ -0.35
PCGF1Q9BSM1 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
PCGF1Q9BSM1 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC12.87□□□□□ -0.35
PCGF1Q9BSM1 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
PCGF1Q9BSM1 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
PCGF1Q9BSM1 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
PCGF1Q9BSM1 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
PCGF1Q9BSM1 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
PCGF1Q9BSM1 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
PCGF1Q9BSM1 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
PCGF1Q9BSM1 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
PCGF1Q9BSM1 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
PCGF1Q9BSM1 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
PCGF1Q9BSM1 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
PCGF1Q9BSM1 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
PCGF1Q9BSM1 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
PCGF1Q9BSM1 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
PCGF1Q9BSM1 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC12.87□□□□□ -0.35
PCGF1Q9BSM1 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC12.87□□□□□ -0.35
PCGF1Q9BSM1 GIMAP3P-201ENST00000495150 836 ntBASIC12.87□□□□□ -0.35
PCGF1Q9BSM1 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC12.87□□□□□ -0.35
PCGF1Q9BSM1 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC12.87□□□□□ -0.35
PCGF1Q9BSM1 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC12.87□□□□□ -0.35
PCGF1Q9BSM1 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC12.87□□□□□ -0.35
PCGF1Q9BSM1 MIR4313-201ENST00000580760 101 ntBASIC12.87□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 129.3 ms