Protein–RNA interactions for Protein: Q9BQ50

TREX2, Three prime repair exonuclease 2, humanhuman

Predicted RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX2Q9BQ50 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
TREX2Q9BQ50 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
TREX2Q9BQ50 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.4□□□□□ -0.1
TREX2Q9BQ50 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TREX2Q9BQ50 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TREX2Q9BQ50 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TREX2Q9BQ50 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
TREX2Q9BQ50 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
TREX2Q9BQ50 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.4□□□□□ -0.1
TREX2Q9BQ50 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
TREX2Q9BQ50 RN7SL618P-201ENST00000477850 296 ntBASIC14.4□□□□□ -0.1
TREX2Q9BQ50 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC14.4□□□□□ -0.1
TREX2Q9BQ50 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TREX2Q9BQ50 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TREX2Q9BQ50 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TREX2Q9BQ50 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.4□□□□□ -0.1
TREX2Q9BQ50 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TREX2Q9BQ50 AC074044.1-201ENST00000609673 707 ntBASIC14.4□□□□□ -0.1
TREX2Q9BQ50 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.4□□□□□ -0.1
TREX2Q9BQ50 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.4□□□□□ -0.1
TREX2Q9BQ50 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TREX2Q9BQ50 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TREX2Q9BQ50 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
TREX2Q9BQ50 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TREX2Q9BQ50 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TREX2Q9BQ50 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TREX2Q9BQ50 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TREX2Q9BQ50 LINC00552-201ENST00000625151 2579 ntBASIC14.4□□□□□ -0.1
TREX2Q9BQ50 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TREX2Q9BQ50 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.4□□□□□ -0.1
TREX2Q9BQ50 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TREX2Q9BQ50 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.4□□□□□ -0.1
TREX2Q9BQ50 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.4□□□□□ -0.1
TREX2Q9BQ50 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TREX2Q9BQ50 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
TREX2Q9BQ50 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TREX2Q9BQ50 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TREX2Q9BQ50 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
TREX2Q9BQ50 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TREX2Q9BQ50 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
TREX2Q9BQ50 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TREX2Q9BQ50 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.39□□□□□ -0.11
TREX2Q9BQ50 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TREX2Q9BQ50 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
TREX2Q9BQ50 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TREX2Q9BQ50 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TREX2Q9BQ50 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TREX2Q9BQ50 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TREX2Q9BQ50 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TREX2Q9BQ50 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TREX2Q9BQ50 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TREX2Q9BQ50 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TREX2Q9BQ50 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
TREX2Q9BQ50 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TREX2Q9BQ50 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TREX2Q9BQ50 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TREX2Q9BQ50 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.39□□□□□ -0.11
TREX2Q9BQ50 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TREX2Q9BQ50 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
TREX2Q9BQ50 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.39□□□□□ -0.11
TREX2Q9BQ50 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC14.39□□□□□ -0.11
TREX2Q9BQ50 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TREX2Q9BQ50 DGCR5-201ENST00000399539 862 ntBASIC14.39□□□□□ -0.11
TREX2Q9BQ50 AL512384.1-201ENST00000406683 331 ntBASIC14.39□□□□□ -0.11
TREX2Q9BQ50 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.39□□□□□ -0.11
TREX2Q9BQ50 AC087499.6-201ENST00000411576 835 ntBASIC14.39□□□□□ -0.11
TREX2Q9BQ50 TOMM22P5-201ENST00000416399 439 ntBASIC14.39□□□□□ -0.11
TREX2Q9BQ50 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.39□□□□□ -0.11
TREX2Q9BQ50 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.39□□□□□ -0.11
TREX2Q9BQ50 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.39□□□□□ -0.11
TREX2Q9BQ50 INE1-201ENST00000456273 945 ntBASIC14.39□□□□□ -0.11
TREX2Q9BQ50 ACA64.2-201ENST00000459014 129 ntBASIC14.39□□□□□ -0.11
TREX2Q9BQ50 KRT18P43-201ENST00000469825 1281 ntBASIC14.39□□□□□ -0.11
TREX2Q9BQ50 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TREX2Q9BQ50 POLE2-203ENST00000553805 496 ntTSL 2 BASIC14.39□□□□□ -0.11
TREX2Q9BQ50 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14.39□□□□□ -0.11
TREX2Q9BQ50 AC025181.2-201ENST00000606994 802 ntBASIC14.39□□□□□ -0.11
TREX2Q9BQ50 AC017083.2-201ENST00000608069 979 ntBASIC14.39□□□□□ -0.11
TREX2Q9BQ50 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
TREX2Q9BQ50 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TREX2Q9BQ50 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.39□□□□□ -0.11
TREX2Q9BQ50 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TREX2Q9BQ50 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TREX2Q9BQ50 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.39□□□□□ -0.11
TREX2Q9BQ50 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
TREX2Q9BQ50 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
TREX2Q9BQ50 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TREX2Q9BQ50 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TREX2Q9BQ50 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TREX2Q9BQ50 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.39□□□□□ -0.11
TREX2Q9BQ50 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
TREX2Q9BQ50 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.39□□□□□ -0.11
TREX2Q9BQ50 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TREX2Q9BQ50 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
TREX2Q9BQ50 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.39□□□□□ -0.11
TREX2Q9BQ50 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
TREX2Q9BQ50 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC14.39□□□□□ -0.11
TREX2Q9BQ50 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
TREX2Q9BQ50 AC023908.3-201ENST00000564211 3047 ntBASIC14.39□□□□□ -0.11
TREX2Q9BQ50 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms