Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM47Q96LD4 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC17.84■□□□□ 0.45
TRIM47Q96LD4 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
TRIM47Q96LD4 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM47Q96LD4 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
TRIM47Q96LD4 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
TRIM47Q96LD4 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
TRIM47Q96LD4 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRIM47Q96LD4 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRIM47Q96LD4 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
TRIM47Q96LD4 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
TRIM47Q96LD4 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC17.83■□□□□ 0.45
TRIM47Q96LD4 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
TRIM47Q96LD4 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC17.83■□□□□ 0.45
TRIM47Q96LD4 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRIM47Q96LD4 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
TRIM47Q96LD4 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
TRIM47Q96LD4 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRIM47Q96LD4 FOS-202ENST00000535987 1402 ntTSL 2 BASIC17.83■□□□□ 0.45
TRIM47Q96LD4 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
TRIM47Q96LD4 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TRIM47Q96LD4 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRIM47Q96LD4 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC17.83■□□□□ 0.44
TRIM47Q96LD4 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC17.83■□□□□ 0.44
TRIM47Q96LD4 DKFZP434H168-201ENST00000567381 1905 ntBASIC17.83■□□□□ 0.44
TRIM47Q96LD4 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC17.83■□□□□ 0.44
TRIM47Q96LD4 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
TRIM47Q96LD4 MPV17-205ENST00000402310 906 ntTSL 5 BASIC17.83■□□□□ 0.44
TRIM47Q96LD4 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC17.83■□□□□ 0.44
TRIM47Q96LD4 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC17.83■□□□□ 0.44
TRIM47Q96LD4 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC17.83■□□□□ 0.44
TRIM47Q96LD4 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC17.83■□□□□ 0.44
TRIM47Q96LD4 POM121L10P-201ENST00000436994 1285 ntBASIC17.83■□□□□ 0.44
TRIM47Q96LD4 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC17.83■□□□□ 0.44
TRIM47Q96LD4 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TRIM47Q96LD4 LDHBP1-201ENST00000455730 1119 ntBASIC17.83■□□□□ 0.44
TRIM47Q96LD4 TMEM198B-204ENST00000484016 896 ntBASIC17.83■□□□□ 0.44
TRIM47Q96LD4 FADS2-212ENST00000522639 360 ntTSL 5 BASIC17.83■□□□□ 0.44
TRIM47Q96LD4 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC17.83■□□□□ 0.44
TRIM47Q96LD4 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC17.83■□□□□ 0.44
TRIM47Q96LD4 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC17.83■□□□□ 0.44
TRIM47Q96LD4 FADS2-215ENST00000574708 385 ntTSL 3 BASIC17.83■□□□□ 0.44
TRIM47Q96LD4 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC17.83■□□□□ 0.44
TRIM47Q96LD4 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC17.83■□□□□ 0.44
TRIM47Q96LD4 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
TRIM47Q96LD4 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRIM47Q96LD4 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC17.83■□□□□ 0.44
TRIM47Q96LD4 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC17.83■□□□□ 0.44
TRIM47Q96LD4 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRIM47Q96LD4 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.83■□□□□ 0.44
TRIM47Q96LD4 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRIM47Q96LD4 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC17.83■□□□□ 0.44
TRIM47Q96LD4 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC17.83■□□□□ 0.44
TRIM47Q96LD4 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC17.83■□□□□ 0.44
TRIM47Q96LD4 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC17.83■□□□□ 0.44
TRIM47Q96LD4 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC17.83■□□□□ 0.44
TRIM47Q96LD4 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
TRIM47Q96LD4 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRIM47Q96LD4 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TRIM47Q96LD4 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRIM47Q96LD4 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC17.82■□□□□ 0.44
TRIM47Q96LD4 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
TRIM47Q96LD4 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM47Q96LD4 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC17.82■□□□□ 0.44
TRIM47Q96LD4 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM47Q96LD4 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM47Q96LD4 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM47Q96LD4 AP001282.1-201ENST00000531301 1499 ntBASIC17.82■□□□□ 0.44
TRIM47Q96LD4 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM47Q96LD4 AC011477.6-201ENST00000604980 1927 ntBASIC17.82■□□□□ 0.44
TRIM47Q96LD4 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
TRIM47Q96LD4 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
TRIM47Q96LD4 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC17.82■□□□□ 0.44
TRIM47Q96LD4 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM47Q96LD4 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM47Q96LD4 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC17.82■□□□□ 0.44
TRIM47Q96LD4 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM47Q96LD4 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM47Q96LD4 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM47Q96LD4 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM47Q96LD4 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM47Q96LD4 DEF8-202ENST00000418391 852 ntTSL 2 BASIC17.82■□□□□ 0.44
TRIM47Q96LD4 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC17.82■□□□□ 0.44
TRIM47Q96LD4 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC17.82■□□□□ 0.44
TRIM47Q96LD4 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC17.82■□□□□ 0.44
TRIM47Q96LD4 GAPDHP40-201ENST00000505218 1006 ntBASIC17.82■□□□□ 0.44
TRIM47Q96LD4 AC126915.1-201ENST00000522847 1038 ntBASIC17.82■□□□□ 0.44
TRIM47Q96LD4 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC17.82■□□□□ 0.44
TRIM47Q96LD4 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM47Q96LD4 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC17.82■□□□□ 0.44
TRIM47Q96LD4 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM47Q96LD4 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC17.82■□□□□ 0.44
TRIM47Q96LD4 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC17.82■□□□□ 0.44
TRIM47Q96LD4 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM47Q96LD4 KLK3-207ENST00000595952 969 ntTSL 3 BASIC17.82■□□□□ 0.44
TRIM47Q96LD4 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC17.82■□□□□ 0.44
TRIM47Q96LD4 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
TRIM47Q96LD4 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC17.82■□□□□ 0.44
TRIM47Q96LD4 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM47Q96LD4 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms