Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
TRIM11Q96F44 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.15■□□□□ 0.18
TRIM11Q96F44 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM11Q96F44 AL138799.1-201ENST00000448213 1675 ntBASIC16.15■□□□□ 0.18
TRIM11Q96F44 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM11Q96F44 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM11Q96F44 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM11Q96F44 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM11Q96F44 PES1-204ENST00000402284 2144 ntTSL 5 BASIC16.15■□□□□ 0.18
TRIM11Q96F44 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM11Q96F44 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM11Q96F44 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM11Q96F44 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM11Q96F44 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM11Q96F44 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.15■□□□□ 0.18
TRIM11Q96F44 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC16.15■□□□□ 0.18
TRIM11Q96F44 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM11Q96F44 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC16.15■□□□□ 0.18
TRIM11Q96F44 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC16.15■□□□□ 0.18
TRIM11Q96F44 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
TRIM11Q96F44 RN7SL399P-201ENST00000471648 279 ntBASIC16.15■□□□□ 0.18
TRIM11Q96F44 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.15■□□□□ 0.18
TRIM11Q96F44 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.15■□□□□ 0.18
TRIM11Q96F44 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.15■□□□□ 0.18
TRIM11Q96F44 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC16.15■□□□□ 0.18
TRIM11Q96F44 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.15■□□□□ 0.18
TRIM11Q96F44 REEP4-207ENST00000523293 913 ntTSL 3 BASIC16.15■□□□□ 0.18
TRIM11Q96F44 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.15■□□□□ 0.18
TRIM11Q96F44 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.15■□□□□ 0.18
TRIM11Q96F44 AC093813.1-201ENST00000605066 256 ntBASIC16.15■□□□□ 0.18
TRIM11Q96F44 AC106028.4-201ENST00000614509 607 ntBASIC16.15■□□□□ 0.18
TRIM11Q96F44 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
TRIM11Q96F44 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM11Q96F44 AC018442.1-201ENST00000421439 2061 ntBASIC16.15■□□□□ 0.18
TRIM11Q96F44 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM11Q96F44 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM11Q96F44 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM11Q96F44 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
TRIM11Q96F44 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC16.14■□□□□ 0.18
TRIM11Q96F44 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM11Q96F44 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM11Q96F44 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC16.14■□□□□ 0.17
TRIM11Q96F44 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM11Q96F44 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM11Q96F44 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC16.14■□□□□ 0.17
TRIM11Q96F44 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM11Q96F44 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM11Q96F44 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC16.14■□□□□ 0.17
TRIM11Q96F44 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC16.14■□□□□ 0.17
TRIM11Q96F44 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
TRIM11Q96F44 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM11Q96F44 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM11Q96F44 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM11Q96F44 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
TRIM11Q96F44 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC16.14■□□□□ 0.17
TRIM11Q96F44 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM11Q96F44 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM11Q96F44 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM11Q96F44 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.14■□□□□ 0.17
TRIM11Q96F44 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC16.14■□□□□ 0.17
TRIM11Q96F44 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.14■□□□□ 0.17
TRIM11Q96F44 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC16.14■□□□□ 0.17
TRIM11Q96F44 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM11Q96F44 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
TRIM11Q96F44 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC16.14■□□□□ 0.17
TRIM11Q96F44 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC16.14■□□□□ 0.17
TRIM11Q96F44 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC16.14■□□□□ 0.17
TRIM11Q96F44 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM11Q96F44 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM11Q96F44 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC16.14■□□□□ 0.17
TRIM11Q96F44 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
TRIM11Q96F44 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM11Q96F44 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM11Q96F44 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM11Q96F44 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM11Q96F44 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM11Q96F44 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC16.13■□□□□ 0.17
TRIM11Q96F44 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC16.13■□□□□ 0.17
TRIM11Q96F44 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM11Q96F44 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
TRIM11Q96F44 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM11Q96F44 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC16.13■□□□□ 0.17
TRIM11Q96F44 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM11Q96F44 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
TRIM11Q96F44 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM11Q96F44 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM11Q96F44 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
TRIM11Q96F44 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM11Q96F44 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM11Q96F44 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM11Q96F44 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM11Q96F44 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM11Q96F44 USP35-204ENST00000530267 2419 ntTSL 2 BASIC16.13■□□□□ 0.17
TRIM11Q96F44 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC16.13■□□□□ 0.17
TRIM11Q96F44 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
TRIM11Q96F44 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM11Q96F44 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM11Q96F44 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM11Q96F44 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC16.13■□□□□ 0.17
TRIM11Q96F44 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms