Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SH3KBP1Q96B97 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SH3KBP1Q96B97 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC15.17■□□□□ 0.02
SH3KBP1Q96B97 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SH3KBP1Q96B97 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
SH3KBP1Q96B97 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SH3KBP1Q96B97 AC105250.1-201ENST00000509378 2057 ntBASIC15.17■□□□□ 0.02
SH3KBP1Q96B97 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SH3KBP1Q96B97 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SH3KBP1Q96B97 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.17■□□□□ 0.02
SH3KBP1Q96B97 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SH3KBP1Q96B97 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
SH3KBP1Q96B97 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
SH3KBP1Q96B97 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SH3KBP1Q96B97 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC15.17■□□□□ 0.02
SH3KBP1Q96B97 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.17■□□□□ 0.02
SH3KBP1Q96B97 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC15.17■□□□□ 0.02
SH3KBP1Q96B97 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SH3KBP1Q96B97 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC15.17■□□□□ 0.02
SH3KBP1Q96B97 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC15.17■□□□□ 0.02
SH3KBP1Q96B97 AC234783.1-201ENST00000441761 496 ntBASIC15.17■□□□□ 0.02
SH3KBP1Q96B97 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC15.17■□□□□ 0.02
SH3KBP1Q96B97 VDAC1P7-201ENST00000462417 847 ntBASIC15.17■□□□□ 0.02
SH3KBP1Q96B97 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC15.17■□□□□ 0.02
SH3KBP1Q96B97 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC15.17■□□□□ 0.02
SH3KBP1Q96B97 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
SH3KBP1Q96B97 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SH3KBP1Q96B97 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SH3KBP1Q96B97 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC15.17■□□□□ 0.02
SH3KBP1Q96B97 AC009486.1-201ENST00000569860 813 ntBASIC15.17■□□□□ 0.02
SH3KBP1Q96B97 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC15.17■□□□□ 0.02
SH3KBP1Q96B97 AC015910.1-201ENST00000579400 975 ntBASIC15.17■□□□□ 0.02
SH3KBP1Q96B97 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC15.17■□□□□ 0.02
SH3KBP1Q96B97 BTNL10-201ENST00000595971 695 ntBASIC15.17■□□□□ 0.02
SH3KBP1Q96B97 AC093813.1-201ENST00000605066 256 ntBASIC15.17■□□□□ 0.02
SH3KBP1Q96B97 CTBP1-AS2-206ENST00000581398 5652 ntBASIC15.17■□□□□ 0.02
SH3KBP1Q96B97 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SH3KBP1Q96B97 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SH3KBP1Q96B97 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SH3KBP1Q96B97 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
SH3KBP1Q96B97 AC090616.6-203ENST00000579186 1945 ntBASIC15.17■□□□□ 0.02
SH3KBP1Q96B97 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SH3KBP1Q96B97 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
SH3KBP1Q96B97 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.17■□□□□ 0.02
SH3KBP1Q96B97 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SH3KBP1Q96B97 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SH3KBP1Q96B97 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SH3KBP1Q96B97 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SH3KBP1Q96B97 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SH3KBP1Q96B97 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SH3KBP1Q96B97 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
SH3KBP1Q96B97 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SH3KBP1Q96B97 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.16■□□□□ 0.02
SH3KBP1Q96B97 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.16■□□□□ 0.02
SH3KBP1Q96B97 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SH3KBP1Q96B97 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SH3KBP1Q96B97 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.16■□□□□ 0.02
SH3KBP1Q96B97 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SH3KBP1Q96B97 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.16■□□□□ 0.02
SH3KBP1Q96B97 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SH3KBP1Q96B97 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
SH3KBP1Q96B97 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SH3KBP1Q96B97 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
SH3KBP1Q96B97 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
SH3KBP1Q96B97 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SH3KBP1Q96B97 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SH3KBP1Q96B97 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SH3KBP1Q96B97 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.16■□□□□ 0.02
SH3KBP1Q96B97 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SH3KBP1Q96B97 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
SH3KBP1Q96B97 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC15.16■□□□□ 0.02
SH3KBP1Q96B97 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
SH3KBP1Q96B97 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
SH3KBP1Q96B97 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
SH3KBP1Q96B97 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
SH3KBP1Q96B97 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC15.16■□□□□ 0.02
SH3KBP1Q96B97 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC15.16■□□□□ 0.02
SH3KBP1Q96B97 ACA64.2-201ENST00000459014 129 ntBASIC15.16■□□□□ 0.02
SH3KBP1Q96B97 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC15.16■□□□□ 0.02
SH3KBP1Q96B97 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC15.16■□□□□ 0.02
SH3KBP1Q96B97 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.16■□□□□ 0.02
SH3KBP1Q96B97 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC15.16■□□□□ 0.02
SH3KBP1Q96B97 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SH3KBP1Q96B97 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC15.16■□□□□ 0.02
SH3KBP1Q96B97 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC15.16■□□□□ 0.02
SH3KBP1Q96B97 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC15.16■□□□□ 0.02
SH3KBP1Q96B97 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC15.16■□□□□ 0.02
SH3KBP1Q96B97 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC15.16■□□□□ 0.02
SH3KBP1Q96B97 PTP4A1P2-201ENST00000546033 454 ntBASIC15.16■□□□□ 0.02
SH3KBP1Q96B97 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC15.16■□□□□ 0.02
SH3KBP1Q96B97 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SH3KBP1Q96B97 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC15.16■□□□□ 0.02
SH3KBP1Q96B97 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.16■□□□□ 0.02
SH3KBP1Q96B97 AC124283.3-201ENST00000570869 594 ntBASIC15.16■□□□□ 0.02
SH3KBP1Q96B97 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.16■□□□□ 0.02
SH3KBP1Q96B97 IFT20-216ENST00000588477 774 ntTSL 5 BASIC15.16■□□□□ 0.02
SH3KBP1Q96B97 AC008735.3-201ENST00000596646 500 ntBASIC15.16■□□□□ 0.02
SH3KBP1Q96B97 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SH3KBP1Q96B97 MIR6805-201ENST00000615055 62 ntBASIC15.16■□□□□ 0.02
SH3KBP1Q96B97 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms