Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
ATP2A3Q93084 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC16.13■□□□□ 0.17
ATP2A3Q93084 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ATP2A3Q93084 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC16.13■□□□□ 0.17
ATP2A3Q93084 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ATP2A3Q93084 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC16.13■□□□□ 0.17
ATP2A3Q93084 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATP2A3Q93084 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC16.13■□□□□ 0.17
ATP2A3Q93084 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
ATP2A3Q93084 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATP2A3Q93084 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATP2A3Q93084 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATP2A3Q93084 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC16.13■□□□□ 0.17
ATP2A3Q93084 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.13■□□□□ 0.17
ATP2A3Q93084 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ATP2A3Q93084 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATP2A3Q93084 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATP2A3Q93084 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATP2A3Q93084 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
ATP2A3Q93084 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATP2A3Q93084 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATP2A3Q93084 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
ATP2A3Q93084 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATP2A3Q93084 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATP2A3Q93084 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATP2A3Q93084 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ATP2A3Q93084 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATP2A3Q93084 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.12■□□□□ 0.17
ATP2A3Q93084 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC16.12■□□□□ 0.17
ATP2A3Q93084 TP73-213ENST00000604479 1623 ntTSL 5 BASIC16.12■□□□□ 0.17
ATP2A3Q93084 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATP2A3Q93084 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
ATP2A3Q93084 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
ATP2A3Q93084 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATP2A3Q93084 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ATP2A3Q93084 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.12■□□□□ 0.17
ATP2A3Q93084 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATP2A3Q93084 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ATP2A3Q93084 AC006486.2-201ENST00000624246 2199 ntBASIC16.12■□□□□ 0.17
ATP2A3Q93084 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
ATP2A3Q93084 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.12■□□□□ 0.17
ATP2A3Q93084 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
ATP2A3Q93084 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATP2A3Q93084 AL133267.1-201ENST00000398220 340 ntBASIC16.12■□□□□ 0.17
ATP2A3Q93084 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC16.12■□□□□ 0.17
ATP2A3Q93084 USB1-202ENST00000423271 1217 ntTSL 2 BASIC16.12■□□□□ 0.17
ATP2A3Q93084 AC012441.1-201ENST00000446669 685 ntBASIC16.12■□□□□ 0.17
ATP2A3Q93084 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC16.12■□□□□ 0.17
ATP2A3Q93084 AC022494.1-201ENST00000466044 728 ntBASIC16.12■□□□□ 0.17
ATP2A3Q93084 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC16.12■□□□□ 0.17
ATP2A3Q93084 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ATP2A3Q93084 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
ATP2A3Q93084 CLUHP6-201ENST00000580789 941 ntBASIC16.12■□□□□ 0.17
ATP2A3Q93084 GPX4-206ENST00000588919 803 ntTSL 2 BASIC16.12■□□□□ 0.17
ATP2A3Q93084 AC093813.1-201ENST00000605066 256 ntBASIC16.12■□□□□ 0.17
ATP2A3Q93084 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC16.12■□□□□ 0.17
ATP2A3Q93084 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC16.12■□□□□ 0.17
ATP2A3Q93084 REXO1L6P-201ENST00000603433 1515 ntBASIC16.12■□□□□ 0.17
ATP2A3Q93084 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATP2A3Q93084 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.12■□□□□ 0.17
ATP2A3Q93084 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
ATP2A3Q93084 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.12■□□□□ 0.17
ATP2A3Q93084 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
ATP2A3Q93084 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATP2A3Q93084 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATP2A3Q93084 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATP2A3Q93084 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATP2A3Q93084 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATP2A3Q93084 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATP2A3Q93084 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
ATP2A3Q93084 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ATP2A3Q93084 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ATP2A3Q93084 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATP2A3Q93084 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
ATP2A3Q93084 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.12■□□□□ 0.17
ATP2A3Q93084 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ATP2A3Q93084 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ATP2A3Q93084 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.11■□□□□ 0.17
ATP2A3Q93084 LINC02228-204ENST00000642115 2962 ntBASIC16.11■□□□□ 0.17
ATP2A3Q93084 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.11■□□□□ 0.17
ATP2A3Q93084 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
ATP2A3Q93084 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ATP2A3Q93084 AC009090.5-201ENST00000624886 2285 ntBASIC16.11■□□□□ 0.17
ATP2A3Q93084 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
ATP2A3Q93084 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ATP2A3Q93084 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.11■□□□□ 0.17
ATP2A3Q93084 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ATP2A3Q93084 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
ATP2A3Q93084 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.11■□□□□ 0.17
ATP2A3Q93084 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.11■□□□□ 0.17
ATP2A3Q93084 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
ATP2A3Q93084 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ATP2A3Q93084 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ATP2A3Q93084 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
ATP2A3Q93084 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ATP2A3Q93084 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ATP2A3Q93084 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.11■□□□□ 0.17
ATP2A3Q93084 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.11■□□□□ 0.17
ATP2A3Q93084 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
ATP2A3Q93084 BRF1-202ENST00000379932 884 ntTSL 5 BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms