Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC14.13□□□□□ -0.15
HPS1Q92902 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
HPS1Q92902 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HPS1Q92902 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC14.13□□□□□ -0.15
HPS1Q92902 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.13□□□□□ -0.15
HPS1Q92902 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC14.13□□□□□ -0.15
HPS1Q92902 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HPS1Q92902 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
HPS1Q92902 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.13□□□□□ -0.15
HPS1Q92902 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HPS1Q92902 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
HPS1Q92902 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
HPS1Q92902 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC14.12□□□□□ -0.15
HPS1Q92902 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
HPS1Q92902 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HPS1Q92902 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.12□□□□□ -0.15
HPS1Q92902 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC14.12□□□□□ -0.15
HPS1Q92902 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HPS1Q92902 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC14.12□□□□□ -0.15
HPS1Q92902 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC14.12□□□□□ -0.15
HPS1Q92902 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HPS1Q92902 SLC9A3P2-201ENST00000447821 2021 ntBASIC14.12□□□□□ -0.15
HPS1Q92902 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HPS1Q92902 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HPS1Q92902 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HPS1Q92902 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
HPS1Q92902 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
HPS1Q92902 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
HPS1Q92902 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
HPS1Q92902 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HPS1Q92902 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
HPS1Q92902 BX640514.1-201ENST00000583223 1918 ntBASIC14.12□□□□□ -0.15
HPS1Q92902 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HPS1Q92902 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
HPS1Q92902 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HPS1Q92902 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
HPS1Q92902 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
HPS1Q92902 HMGA1P7-201ENST00000406908 502 ntBASIC14.12□□□□□ -0.15
HPS1Q92902 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC14.12□□□□□ -0.15
HPS1Q92902 AL355306.1-201ENST00000415580 579 ntBASIC14.12□□□□□ -0.15
HPS1Q92902 AL671277.1-201ENST00000429656 993 ntBASIC14.12□□□□□ -0.15
HPS1Q92902 ADH5P3-201ENST00000433842 1137 ntBASIC14.12□□□□□ -0.15
HPS1Q92902 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.12□□□□□ -0.15
HPS1Q92902 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
HPS1Q92902 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
HPS1Q92902 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC14.12□□□□□ -0.15
HPS1Q92902 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HPS1Q92902 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
HPS1Q92902 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HPS1Q92902 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
HPS1Q92902 AL161645.1-201ENST00000622716 1255 ntBASIC14.12□□□□□ -0.15
HPS1Q92902 AC093028.1-201ENST00000622998 982 ntBASIC14.12□□□□□ -0.15
HPS1Q92902 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
HPS1Q92902 AC112693.3-201ENST00000624819 1983 ntBASIC14.12□□□□□ -0.15
HPS1Q92902 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
HPS1Q92902 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
HPS1Q92902 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HPS1Q92902 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
HPS1Q92902 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC14.12□□□□□ -0.15
HPS1Q92902 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.12□□□□□ -0.15
HPS1Q92902 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC14.12□□□□□ -0.15
HPS1Q92902 INTS4P1-203ENST00000641008 3683 ntBASIC14.12□□□□□ -0.15
HPS1Q92902 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HPS1Q92902 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HPS1Q92902 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC14.12□□□□□ -0.15
HPS1Q92902 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
HPS1Q92902 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HPS1Q92902 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC14.11□□□□□ -0.15
HPS1Q92902 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
HPS1Q92902 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HPS1Q92902 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
HPS1Q92902 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HPS1Q92902 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
HPS1Q92902 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
HPS1Q92902 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC14.11□□□□□ -0.15
HPS1Q92902 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HPS1Q92902 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.11□□□□□ -0.15
HPS1Q92902 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
HPS1Q92902 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.11□□□□□ -0.15
HPS1Q92902 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HPS1Q92902 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HPS1Q92902 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HPS1Q92902 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HPS1Q92902 AL139400.1-201ENST00000366220 510 ntBASIC14.11□□□□□ -0.15
HPS1Q92902 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HPS1Q92902 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC14.11□□□□□ -0.15
HPS1Q92902 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
HPS1Q92902 RNU1-129P-201ENST00000384064 167 ntBASIC14.11□□□□□ -0.15
HPS1Q92902 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC14.11□□□□□ -0.15
HPS1Q92902 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
HPS1Q92902 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
HPS1Q92902 SPDYE11-202ENST00000450699 704 ntBASIC14.11□□□□□ -0.15
HPS1Q92902 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
HPS1Q92902 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC14.11□□□□□ -0.15
HPS1Q92902 AC067863.1-201ENST00000494933 530 ntBASIC14.11□□□□□ -0.15
HPS1Q92902 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC14.11□□□□□ -0.15
HPS1Q92902 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC14.11□□□□□ -0.15
HPS1Q92902 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC14.11□□□□□ -0.15
HPS1Q92902 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC14.11□□□□□ -0.15
HPS1Q92902 AC109635.5-201ENST00000533593 962 ntBASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms