Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
DDX1Q92499 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
DDX1Q92499 C1QBPP1-201ENST00000400117 770 ntBASIC16.2■□□□□ 0.18
DDX1Q92499 ELK1P1-201ENST00000485699 580 ntBASIC16.2■□□□□ 0.18
DDX1Q92499 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC16.2■□□□□ 0.18
DDX1Q92499 HNRNPA1P13-201ENST00000510646 963 ntBASIC16.2■□□□□ 0.18
DDX1Q92499 AC104596.2-201ENST00000512793 793 ntBASIC16.2■□□□□ 0.18
DDX1Q92499 AC104989.1-201ENST00000519711 778 ntBASIC16.2■□□□□ 0.18
DDX1Q92499 CD74-212ENST00000524315 584 ntTSL 5 BASIC16.2■□□□□ 0.18
DDX1Q92499 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC16.2■□□□□ 0.18
DDX1Q92499 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC16.2■□□□□ 0.18
DDX1Q92499 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC16.2■□□□□ 0.18
DDX1Q92499 ORC6-206ENST00000568364 888 ntTSL 5 BASIC16.2■□□□□ 0.18
DDX1Q92499 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC16.2■□□□□ 0.18
DDX1Q92499 MIR4538-201ENST00000581377 78 ntBASIC16.2■□□□□ 0.18
DDX1Q92499 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
DDX1Q92499 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
DDX1Q92499 BX539320.1-201ENST00000623759 877 ntBASIC16.2■□□□□ 0.18
DDX1Q92499 AC023090.2-201ENST00000625182 2110 ntBASIC16.2■□□□□ 0.18
DDX1Q92499 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
DDX1Q92499 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
DDX1Q92499 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
DDX1Q92499 HNRNPA1P48-201ENST00000562726 1377 ntBASIC16.2■□□□□ 0.18
DDX1Q92499 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
DDX1Q92499 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
DDX1Q92499 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC16.2■□□□□ 0.18
DDX1Q92499 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.2■□□□□ 0.18
DDX1Q92499 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
DDX1Q92499 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
DDX1Q92499 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
DDX1Q92499 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
DDX1Q92499 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
DDX1Q92499 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
DDX1Q92499 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
DDX1Q92499 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
DDX1Q92499 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
DDX1Q92499 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
DDX1Q92499 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
DDX1Q92499 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
DDX1Q92499 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
DDX1Q92499 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
DDX1Q92499 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
DDX1Q92499 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
DDX1Q92499 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC16.19■□□□□ 0.18
DDX1Q92499 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
DDX1Q92499 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC16.19■□□□□ 0.18
DDX1Q92499 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
DDX1Q92499 AC020907.1-201ENST00000616460 1350 ntBASIC16.19■□□□□ 0.18
DDX1Q92499 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
DDX1Q92499 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
DDX1Q92499 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
DDX1Q92499 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC16.19■□□□□ 0.18
DDX1Q92499 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC16.19■□□□□ 0.18
DDX1Q92499 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
DDX1Q92499 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC16.19■□□□□ 0.18
DDX1Q92499 KRT43P-201ENST00000434019 910 ntBASIC16.19■□□□□ 0.18
DDX1Q92499 MYCLP2-201ENST00000449268 967 ntBASIC16.19■□□□□ 0.18
DDX1Q92499 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC16.19■□□□□ 0.18
DDX1Q92499 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC16.19■□□□□ 0.18
DDX1Q92499 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC16.19■□□□□ 0.18
DDX1Q92499 DUX4L47-201ENST00000566374 394 ntBASIC16.19■□□□□ 0.18
DDX1Q92499 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC16.19■□□□□ 0.18
DDX1Q92499 MIR4259-201ENST00000584466 101 ntBASIC16.19■□□□□ 0.18
DDX1Q92499 CTBP2P3-201ENST00000585629 1255 ntBASIC16.19■□□□□ 0.18
DDX1Q92499 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC16.19■□□□□ 0.18
DDX1Q92499 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC16.19■□□□□ 0.18
DDX1Q92499 MIR6869-201ENST00000619434 62 ntBASIC16.19■□□□□ 0.18
DDX1Q92499 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
DDX1Q92499 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
DDX1Q92499 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC16.19■□□□□ 0.18
DDX1Q92499 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
DDX1Q92499 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
DDX1Q92499 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC16.19■□□□□ 0.18
DDX1Q92499 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
DDX1Q92499 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC16.19■□□□□ 0.18
DDX1Q92499 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
DDX1Q92499 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
DDX1Q92499 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
DDX1Q92499 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
DDX1Q92499 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC16.19■□□□□ 0.18
DDX1Q92499 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
DDX1Q92499 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
DDX1Q92499 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
DDX1Q92499 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
DDX1Q92499 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.18■□□□□ 0.18
DDX1Q92499 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
DDX1Q92499 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
DDX1Q92499 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
DDX1Q92499 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC16.18■□□□□ 0.18
DDX1Q92499 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
DDX1Q92499 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC16.18■□□□□ 0.18
DDX1Q92499 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
DDX1Q92499 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC16.18■□□□□ 0.18
DDX1Q92499 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
DDX1Q92499 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC16.18■□□□□ 0.18
DDX1Q92499 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
DDX1Q92499 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
DDX1Q92499 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
DDX1Q92499 AL139094.1-201ENST00000405549 1188 ntBASIC16.18■□□□□ 0.18
DDX1Q92499 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms