Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PTCD2Q8WV60 ZBTB45P1-201ENST00000452761 1456 ntBASIC15.57■□□□□ 0.08
PTCD2Q8WV60 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
PTCD2Q8WV60 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
PTCD2Q8WV60 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PTCD2Q8WV60 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PTCD2Q8WV60 FAM45BP-202ENST00000592932 1624 ntBASIC15.57■□□□□ 0.08
PTCD2Q8WV60 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PTCD2Q8WV60 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PTCD2Q8WV60 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PTCD2Q8WV60 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PTCD2Q8WV60 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC15.57■□□□□ 0.08
PTCD2Q8WV60 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
PTCD2Q8WV60 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
PTCD2Q8WV60 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
PTCD2Q8WV60 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PTCD2Q8WV60 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.56■□□□□ 0.08
PTCD2Q8WV60 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.56■□□□□ 0.08
PTCD2Q8WV60 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
PTCD2Q8WV60 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PTCD2Q8WV60 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.56■□□□□ 0.08
PTCD2Q8WV60 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.56■□□□□ 0.08
PTCD2Q8WV60 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
PTCD2Q8WV60 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
PTCD2Q8WV60 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
PTCD2Q8WV60 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PTCD2Q8WV60 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.56■□□□□ 0.08
PTCD2Q8WV60 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.56■□□□□ 0.08
PTCD2Q8WV60 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PTCD2Q8WV60 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
PTCD2Q8WV60 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
PTCD2Q8WV60 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
PTCD2Q8WV60 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PTCD2Q8WV60 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PTCD2Q8WV60 AC017099.1-201ENST00000448261 1028 ntBASIC15.56■□□□□ 0.08
PTCD2Q8WV60 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC15.56■□□□□ 0.08
PTCD2Q8WV60 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
PTCD2Q8WV60 AP001830.1-201ENST00000528717 692 ntTSL 2 BASIC15.56■□□□□ 0.08
PTCD2Q8WV60 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC15.56■□□□□ 0.08
PTCD2Q8WV60 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.56■□□□□ 0.08
PTCD2Q8WV60 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15.56■□□□□ 0.08
PTCD2Q8WV60 RARRES2P5-201ENST00000564013 466 ntBASIC15.56■□□□□ 0.08
PTCD2Q8WV60 AP001198.2-201ENST00000593121 466 ntTSL 2 BASIC15.56■□□□□ 0.08
PTCD2Q8WV60 AC097478.2-201ENST00000610572 514 ntBASIC15.56■□□□□ 0.08
PTCD2Q8WV60 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.56■□□□□ 0.08
PTCD2Q8WV60 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
PTCD2Q8WV60 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.56■□□□□ 0.08
PTCD2Q8WV60 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PTCD2Q8WV60 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
PTCD2Q8WV60 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
PTCD2Q8WV60 AL391825.1-201ENST00000457671 1364 ntBASIC15.56■□□□□ 0.08
PTCD2Q8WV60 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC15.56■□□□□ 0.08
PTCD2Q8WV60 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PTCD2Q8WV60 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PTCD2Q8WV60 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PTCD2Q8WV60 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PTCD2Q8WV60 REXO1L2P-201ENST00000425429 2069 ntBASIC15.56■□□□□ 0.08
PTCD2Q8WV60 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PTCD2Q8WV60 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
PTCD2Q8WV60 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PTCD2Q8WV60 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
PTCD2Q8WV60 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PTCD2Q8WV60 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PTCD2Q8WV60 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PTCD2Q8WV60 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PTCD2Q8WV60 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PTCD2Q8WV60 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
PTCD2Q8WV60 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
PTCD2Q8WV60 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
PTCD2Q8WV60 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
PTCD2Q8WV60 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PTCD2Q8WV60 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PTCD2Q8WV60 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.55■□□□□ 0.08
PTCD2Q8WV60 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PTCD2Q8WV60 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.55■□□□□ 0.08
PTCD2Q8WV60 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PTCD2Q8WV60 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.55■□□□□ 0.08
PTCD2Q8WV60 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.55■□□□□ 0.08
PTCD2Q8WV60 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PTCD2Q8WV60 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PTCD2Q8WV60 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
PTCD2Q8WV60 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PTCD2Q8WV60 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PTCD2Q8WV60 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PTCD2Q8WV60 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
PTCD2Q8WV60 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PTCD2Q8WV60 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PTCD2Q8WV60 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
PTCD2Q8WV60 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.55■□□□□ 0.08
PTCD2Q8WV60 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PTCD2Q8WV60 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PTCD2Q8WV60 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
PTCD2Q8WV60 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PTCD2Q8WV60 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PTCD2Q8WV60 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PTCD2Q8WV60 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PTCD2Q8WV60 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PTCD2Q8WV60 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PTCD2Q8WV60 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PTCD2Q8WV60 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms