Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
SHKBP1Q8TBC3 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC16■□□□□ 0.15
SHKBP1Q8TBC3 CICP24-201ENST00000605464 2705 ntBASIC16■□□□□ 0.15
SHKBP1Q8TBC3 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC16■□□□□ 0.15
SHKBP1Q8TBC3 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
SHKBP1Q8TBC3 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16■□□□□ 0.15
SHKBP1Q8TBC3 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16■□□□□ 0.15
SHKBP1Q8TBC3 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
SHKBP1Q8TBC3 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SHKBP1Q8TBC3 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.99■□□□□ 0.15
SHKBP1Q8TBC3 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
SHKBP1Q8TBC3 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SHKBP1Q8TBC3 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SHKBP1Q8TBC3 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
SHKBP1Q8TBC3 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SHKBP1Q8TBC3 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SHKBP1Q8TBC3 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SHKBP1Q8TBC3 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SHKBP1Q8TBC3 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SHKBP1Q8TBC3 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SHKBP1Q8TBC3 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SHKBP1Q8TBC3 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SHKBP1Q8TBC3 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
SHKBP1Q8TBC3 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SHKBP1Q8TBC3 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SHKBP1Q8TBC3 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SHKBP1Q8TBC3 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SHKBP1Q8TBC3 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SHKBP1Q8TBC3 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SHKBP1Q8TBC3 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
SHKBP1Q8TBC3 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC15.99■□□□□ 0.15
SHKBP1Q8TBC3 B9D1-203ENST00000395615 805 ntTSL 3 BASIC15.99■□□□□ 0.15
SHKBP1Q8TBC3 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SHKBP1Q8TBC3 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
SHKBP1Q8TBC3 MTX1P1-201ENST00000440904 838 ntBASIC15.99■□□□□ 0.15
SHKBP1Q8TBC3 KRT8P13-201ENST00000463294 1010 ntBASIC15.99■□□□□ 0.15
SHKBP1Q8TBC3 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC15.99■□□□□ 0.15
SHKBP1Q8TBC3 EEF1DP1-201ENST00000585891 896 ntBASIC15.99■□□□□ 0.15
SHKBP1Q8TBC3 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
SHKBP1Q8TBC3 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC15.99■□□□□ 0.15
SHKBP1Q8TBC3 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SHKBP1Q8TBC3 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SHKBP1Q8TBC3 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
SHKBP1Q8TBC3 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SHKBP1Q8TBC3 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SHKBP1Q8TBC3 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.99■□□□□ 0.15
SHKBP1Q8TBC3 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SHKBP1Q8TBC3 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
SHKBP1Q8TBC3 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
SHKBP1Q8TBC3 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SHKBP1Q8TBC3 AL354989.2-201ENST00000435838 1540 ntBASIC15.99■□□□□ 0.15
SHKBP1Q8TBC3 AC136621.1-201ENST00000624017 2304 ntBASIC15.99■□□□□ 0.15
SHKBP1Q8TBC3 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SHKBP1Q8TBC3 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SHKBP1Q8TBC3 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.98■□□□□ 0.15
SHKBP1Q8TBC3 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SHKBP1Q8TBC3 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SHKBP1Q8TBC3 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.98■□□□□ 0.15
SHKBP1Q8TBC3 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SHKBP1Q8TBC3 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
SHKBP1Q8TBC3 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SHKBP1Q8TBC3 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SHKBP1Q8TBC3 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SHKBP1Q8TBC3 RPS3-201ENST00000278572 907 ntTSL 3 BASIC15.98■□□□□ 0.15
SHKBP1Q8TBC3 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
SHKBP1Q8TBC3 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
SHKBP1Q8TBC3 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SHKBP1Q8TBC3 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SHKBP1Q8TBC3 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SHKBP1Q8TBC3 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SHKBP1Q8TBC3 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
SHKBP1Q8TBC3 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
SHKBP1Q8TBC3 AGER-203ENST00000375065 665 ntTSL 2 BASIC15.98■□□□□ 0.15
SHKBP1Q8TBC3 AL645937.2-201ENST00000396808 931 ntBASIC15.98■□□□□ 0.15
SHKBP1Q8TBC3 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SHKBP1Q8TBC3 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC15.98■□□□□ 0.15
SHKBP1Q8TBC3 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC15.98■□□□□ 0.15
SHKBP1Q8TBC3 RPSAP36-202ENST00000494591 1261 ntBASIC15.98■□□□□ 0.15
SHKBP1Q8TBC3 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC15.98■□□□□ 0.15
SHKBP1Q8TBC3 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SHKBP1Q8TBC3 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
SHKBP1Q8TBC3 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC15.98■□□□□ 0.15
SHKBP1Q8TBC3 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC15.98■□□□□ 0.15
SHKBP1Q8TBC3 IGHV3OR16-16-201ENST00000563644 343 ntBASIC15.98■□□□□ 0.15
SHKBP1Q8TBC3 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SHKBP1Q8TBC3 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC15.98■□□□□ 0.15
SHKBP1Q8TBC3 ENPP7P14-201ENST00000621765 1040 ntBASIC15.98■□□□□ 0.15
SHKBP1Q8TBC3 AL008638.5-201ENST00000623814 1298 ntBASIC15.98■□□□□ 0.15
SHKBP1Q8TBC3 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC15.98■□□□□ 0.15
SHKBP1Q8TBC3 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SHKBP1Q8TBC3 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
SHKBP1Q8TBC3 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC15.98■□□□□ 0.15
SHKBP1Q8TBC3 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.98■□□□□ 0.15
SHKBP1Q8TBC3 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
SHKBP1Q8TBC3 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SHKBP1Q8TBC3 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
SHKBP1Q8TBC3 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SHKBP1Q8TBC3 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
SHKBP1Q8TBC3 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
SHKBP1Q8TBC3 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms