Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NKX2-3Q8TAU0 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
NKX2-3Q8TAU0 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
NKX2-3Q8TAU0 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
NKX2-3Q8TAU0 AC023090.2-201ENST00000625182 2110 ntBASIC17.93■□□□□ 0.46
NKX2-3Q8TAU0 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
NKX2-3Q8TAU0 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NKX2-3Q8TAU0 LILRP1-201ENST00000444199 1370 ntBASIC17.93■□□□□ 0.46
NKX2-3Q8TAU0 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NKX2-3Q8TAU0 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NKX2-3Q8TAU0 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC17.93■□□□□ 0.46
NKX2-3Q8TAU0 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
NKX2-3Q8TAU0 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NKX2-3Q8TAU0 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC17.93■□□□□ 0.46
NKX2-3Q8TAU0 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC17.93■□□□□ 0.46
NKX2-3Q8TAU0 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NKX2-3Q8TAU0 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
NKX2-3Q8TAU0 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC17.93■□□□□ 0.46
NKX2-3Q8TAU0 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NKX2-3Q8TAU0 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
NKX2-3Q8TAU0 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
NKX2-3Q8TAU0 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
NKX2-3Q8TAU0 FAM197Y7-201ENST00000432892 766 ntBASIC17.93■□□□□ 0.46
NKX2-3Q8TAU0 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
NKX2-3Q8TAU0 AC114812.1-204ENST00000449669 728 ntBASIC17.93■□□□□ 0.46
NKX2-3Q8TAU0 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC17.93■□□□□ 0.46
NKX2-3Q8TAU0 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC17.93■□□□□ 0.46
NKX2-3Q8TAU0 AC105129.2-201ENST00000559536 390 ntBASIC17.93■□□□□ 0.46
NKX2-3Q8TAU0 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC17.93■□□□□ 0.46
NKX2-3Q8TAU0 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NKX2-3Q8TAU0 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC17.93■□□□□ 0.46
NKX2-3Q8TAU0 AC020914.3-201ENST00000594712 304 ntBASIC17.93■□□□□ 0.46
NKX2-3Q8TAU0 ETV2-208ENST00000621247 941 ntTSL 5 BASIC17.93■□□□□ 0.46
NKX2-3Q8TAU0 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
NKX2-3Q8TAU0 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
NKX2-3Q8TAU0 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NKX2-3Q8TAU0 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NKX2-3Q8TAU0 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NKX2-3Q8TAU0 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NKX2-3Q8TAU0 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
NKX2-3Q8TAU0 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
NKX2-3Q8TAU0 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NKX2-3Q8TAU0 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NKX2-3Q8TAU0 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NKX2-3Q8TAU0 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NKX2-3Q8TAU0 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NKX2-3Q8TAU0 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NKX2-3Q8TAU0 INE2-201ENST00000630399 1874 ntBASIC17.92■□□□□ 0.46
NKX2-3Q8TAU0 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NKX2-3Q8TAU0 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NKX2-3Q8TAU0 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC17.92■□□□□ 0.46
NKX2-3Q8TAU0 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NKX2-3Q8TAU0 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NKX2-3Q8TAU0 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NKX2-3Q8TAU0 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC17.92■□□□□ 0.46
NKX2-3Q8TAU0 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
NKX2-3Q8TAU0 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC17.92■□□□□ 0.46
NKX2-3Q8TAU0 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NKX2-3Q8TAU0 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NKX2-3Q8TAU0 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC17.92■□□□□ 0.46
NKX2-3Q8TAU0 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
NKX2-3Q8TAU0 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
NKX2-3Q8TAU0 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
NKX2-3Q8TAU0 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NKX2-3Q8TAU0 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC17.92■□□□□ 0.46
NKX2-3Q8TAU0 AC005077.2-201ENST00000449786 690 ntBASIC17.92■□□□□ 0.46
NKX2-3Q8TAU0 LDHBP1-201ENST00000455730 1119 ntBASIC17.92■□□□□ 0.46
NKX2-3Q8TAU0 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC17.92■□□□□ 0.46
NKX2-3Q8TAU0 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC17.92■□□□□ 0.46
NKX2-3Q8TAU0 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC17.92■□□□□ 0.46
NKX2-3Q8TAU0 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC17.92■□□□□ 0.46
NKX2-3Q8TAU0 AC244517.3-201ENST00000616254 1235 ntBASIC17.92■□□□□ 0.46
NKX2-3Q8TAU0 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
NKX2-3Q8TAU0 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NKX2-3Q8TAU0 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NKX2-3Q8TAU0 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NKX2-3Q8TAU0 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
NKX2-3Q8TAU0 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
NKX2-3Q8TAU0 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC17.91■□□□□ 0.46
NKX2-3Q8TAU0 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NKX2-3Q8TAU0 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC17.91■□□□□ 0.46
NKX2-3Q8TAU0 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
NKX2-3Q8TAU0 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
NKX2-3Q8TAU0 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NKX2-3Q8TAU0 GSN-203ENST00000373808 2664 ntTSL 2 BASIC17.91■□□□□ 0.46
NKX2-3Q8TAU0 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC17.91■□□□□ 0.46
NKX2-3Q8TAU0 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
NKX2-3Q8TAU0 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
NKX2-3Q8TAU0 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC17.91■□□□□ 0.46
NKX2-3Q8TAU0 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NKX2-3Q8TAU0 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NKX2-3Q8TAU0 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
NKX2-3Q8TAU0 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NKX2-3Q8TAU0 POM121L8P-201ENST00000417732 1281 ntBASIC17.91■□□□□ 0.46
NKX2-3Q8TAU0 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC17.91■□□□□ 0.46
NKX2-3Q8TAU0 POM121L9P-203ENST00000441984 1285 ntBASIC17.91■□□□□ 0.46
NKX2-3Q8TAU0 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC17.91■□□□□ 0.46
NKX2-3Q8TAU0 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC17.91■□□□□ 0.46
NKX2-3Q8TAU0 AHRR-211ENST00000515206 462 ntTSL 5 BASIC17.91■□□□□ 0.46
NKX2-3Q8TAU0 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms