Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCDC168Q8NDH2 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CCDC168Q8NDH2 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC12.6□□□□□ -0.39
CCDC168Q8NDH2 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCDC168Q8NDH2 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCDC168Q8NDH2 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC12.6□□□□□ -0.39
CCDC168Q8NDH2 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CCDC168Q8NDH2 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
CCDC168Q8NDH2 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
CCDC168Q8NDH2 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC12.6□□□□□ -0.39
CCDC168Q8NDH2 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCDC168Q8NDH2 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCDC168Q8NDH2 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CCDC168Q8NDH2 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CCDC168Q8NDH2 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
CCDC168Q8NDH2 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
CCDC168Q8NDH2 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCDC168Q8NDH2 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC12.6□□□□□ -0.39
CCDC168Q8NDH2 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC12.6□□□□□ -0.39
CCDC168Q8NDH2 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC12.6□□□□□ -0.39
CCDC168Q8NDH2 AC012441.2-201ENST00000444843 739 ntBASIC12.6□□□□□ -0.39
CCDC168Q8NDH2 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC12.6□□□□□ -0.39
CCDC168Q8NDH2 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC12.6□□□□□ -0.39
CCDC168Q8NDH2 AC022616.1-201ENST00000518688 554 ntBASIC12.6□□□□□ -0.39
CCDC168Q8NDH2 AL603764.1-201ENST00000636452 321 ntBASIC12.6□□□□□ -0.39
CCDC168Q8NDH2 AC106886.4-201ENST00000623557 2502 ntBASIC12.6□□□□□ -0.39
CCDC168Q8NDH2 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCDC168Q8NDH2 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCDC168Q8NDH2 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CCDC168Q8NDH2 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCDC168Q8NDH2 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CCDC168Q8NDH2 E2F3P2-201ENST00000447755 1422 ntBASIC12.59□□□□□ -0.39
CCDC168Q8NDH2 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCDC168Q8NDH2 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC12.59□□□□□ -0.39
CCDC168Q8NDH2 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
CCDC168Q8NDH2 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CCDC168Q8NDH2 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCDC168Q8NDH2 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
CCDC168Q8NDH2 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CCDC168Q8NDH2 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CCDC168Q8NDH2 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CCDC168Q8NDH2 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC12.59□□□□□ -0.39
CCDC168Q8NDH2 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CCDC168Q8NDH2 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCDC168Q8NDH2 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC12.59□□□□□ -0.39
CCDC168Q8NDH2 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC12.59□□□□□ -0.39
CCDC168Q8NDH2 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC12.59□□□□□ -0.39
CCDC168Q8NDH2 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC12.59□□□□□ -0.39
CCDC168Q8NDH2 AC004837.1-201ENST00000446267 564 ntBASIC12.59□□□□□ -0.39
CCDC168Q8NDH2 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC12.59□□□□□ -0.39
CCDC168Q8NDH2 HNRNPA1P42-201ENST00000458678 957 ntBASIC12.59□□□□□ -0.39
CCDC168Q8NDH2 S100A2-205ENST00000487430 752 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCDC168Q8NDH2 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC12.59□□□□□ -0.39
CCDC168Q8NDH2 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC12.59□□□□□ -0.39
CCDC168Q8NDH2 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC12.59□□□□□ -0.39
CCDC168Q8NDH2 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CCDC168Q8NDH2 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
CCDC168Q8NDH2 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCDC168Q8NDH2 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCDC168Q8NDH2 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCDC168Q8NDH2 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
CCDC168Q8NDH2 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC12.59□□□□□ -0.39
CCDC168Q8NDH2 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC12.59□□□□□ -0.39
CCDC168Q8NDH2 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCDC168Q8NDH2 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
CCDC168Q8NDH2 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CCDC168Q8NDH2 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
CCDC168Q8NDH2 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCDC168Q8NDH2 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC12.59□□□□□ -0.39
CCDC168Q8NDH2 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCDC168Q8NDH2 NHP2-202ENST00000314397 599 ntTSL 2 BASIC12.59□□□□□ -0.39
CCDC168Q8NDH2 AL592076.1-201ENST00000424448 303 ntBASIC12.59□□□□□ -0.39
CCDC168Q8NDH2 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CCDC168Q8NDH2 LINC00634-202ENST00000505157 222 ntBASIC12.59□□□□□ -0.39
CCDC168Q8NDH2 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC12.59□□□□□ -0.39
CCDC168Q8NDH2 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC12.59□□□□□ -0.39
CCDC168Q8NDH2 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC12.59□□□□□ -0.39
CCDC168Q8NDH2 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
CCDC168Q8NDH2 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
CCDC168Q8NDH2 CMC2-224ENST00000630396 481 ntTSL 5 BASIC12.59□□□□□ -0.39
CCDC168Q8NDH2 Z98259.2-201ENST00000641583 609 ntBASIC12.59□□□□□ -0.39
CCDC168Q8NDH2 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCDC168Q8NDH2 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCDC168Q8NDH2 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.39
CCDC168Q8NDH2 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.39
CCDC168Q8NDH2 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.39
CCDC168Q8NDH2 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
CCDC168Q8NDH2 RAN-210ENST00000541630 1475 ntTSL 2 BASIC12.58□□□□□ -0.39
CCDC168Q8NDH2 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
CCDC168Q8NDH2 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC12.58□□□□□ -0.39
CCDC168Q8NDH2 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.39
CCDC168Q8NDH2 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
CCDC168Q8NDH2 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CCDC168Q8NDH2 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC12.58□□□□□ -0.4
CCDC168Q8NDH2 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCDC168Q8NDH2 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC12.58□□□□□ -0.4
CCDC168Q8NDH2 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC12.58□□□□□ -0.4
CCDC168Q8NDH2 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCDC168Q8NDH2 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCDC168Q8NDH2 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms