Protein–RNA interactions for Protein: Q86XW9

NME9, Thioredoxin domain-containing protein 6, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NME9Q86XW9 AL805961.1-203ENST00000641078 1258 ntBASIC20.3■□□□□ 0.84
NME9Q86XW9 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
NME9Q86XW9 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
NME9Q86XW9 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NME9Q86XW9 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NME9Q86XW9 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NME9Q86XW9 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
NME9Q86XW9 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NME9Q86XW9 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NME9Q86XW9 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NME9Q86XW9 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
NME9Q86XW9 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NME9Q86XW9 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC20.29■□□□□ 0.84
NME9Q86XW9 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NME9Q86XW9 MBLAC2-202ENST00000514906 1936 ntBASIC20.29■□□□□ 0.84
NME9Q86XW9 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NME9Q86XW9 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NME9Q86XW9 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC20.29■□□□□ 0.84
NME9Q86XW9 AC006058.4-201ENST00000624016 1670 ntBASIC20.29■□□□□ 0.84
NME9Q86XW9 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NME9Q86XW9 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NME9Q86XW9 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NME9Q86XW9 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC20.29■□□□□ 0.84
NME9Q86XW9 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
NME9Q86XW9 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NME9Q86XW9 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NME9Q86XW9 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NME9Q86XW9 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NME9Q86XW9 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC20.29■□□□□ 0.84
NME9Q86XW9 AC007950.2-201ENST00000615045 2347 ntBASIC20.29■□□□□ 0.84
NME9Q86XW9 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
NME9Q86XW9 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NME9Q86XW9 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC20.29■□□□□ 0.84
NME9Q86XW9 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NME9Q86XW9 GGCT-203ENST00000409144 836 ntTSL 2 BASIC20.29■□□□□ 0.84
NME9Q86XW9 SERF2-209ENST00000409646 559 ntTSL 4 BASIC20.29■□□□□ 0.84
NME9Q86XW9 HLA-DQB2-229ENST00000411527 1059 ntBASIC20.29■□□□□ 0.84
NME9Q86XW9 Z97180.1-201ENST00000445173 988 ntBASIC20.29■□□□□ 0.84
NME9Q86XW9 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC20.29■□□□□ 0.84
NME9Q86XW9 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC20.29■□□□□ 0.84
NME9Q86XW9 AC012618.1-201ENST00000461223 412 ntBASIC20.29■□□□□ 0.84
NME9Q86XW9 AC125604.1-201ENST00000496255 707 ntBASIC20.29■□□□□ 0.84
NME9Q86XW9 AC134698.3-201ENST00000523880 214 ntBASIC20.29■□□□□ 0.84
NME9Q86XW9 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NME9Q86XW9 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC20.29■□□□□ 0.84
NME9Q86XW9 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC20.29■□□□□ 0.84
NME9Q86XW9 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC20.29■□□□□ 0.84
NME9Q86XW9 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC20.29■□□□□ 0.84
NME9Q86XW9 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
NME9Q86XW9 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC20.29■□□□□ 0.84
NME9Q86XW9 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NME9Q86XW9 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NME9Q86XW9 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NME9Q86XW9 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NME9Q86XW9 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC20.29■□□□□ 0.84
NME9Q86XW9 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC20.29■□□□□ 0.84
NME9Q86XW9 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC20.29■□□□□ 0.84
NME9Q86XW9 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
NME9Q86XW9 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NME9Q86XW9 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
NME9Q86XW9 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NME9Q86XW9 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NME9Q86XW9 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NME9Q86XW9 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NME9Q86XW9 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NME9Q86XW9 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC20.28■□□□□ 0.84
NME9Q86XW9 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
NME9Q86XW9 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NME9Q86XW9 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
NME9Q86XW9 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
NME9Q86XW9 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
NME9Q86XW9 PTPA-217ENST00000434095 870 ntTSL 2 BASIC20.28■□□□□ 0.84
NME9Q86XW9 HLA-J-204ENST00000495278 958 ntBASIC20.28■□□□□ 0.84
NME9Q86XW9 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NME9Q86XW9 SYT17-208ENST00000568433 812 ntTSL 3 BASIC20.28■□□□□ 0.84
NME9Q86XW9 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC20.28■□□□□ 0.84
NME9Q86XW9 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC20.28■□□□□ 0.84
NME9Q86XW9 RN7SL190P-201ENST00000582519 257 ntBASIC20.28■□□□□ 0.84
NME9Q86XW9 HCG18-245ENST00000602550 559 ntTSL 4 BASIC20.28■□□□□ 0.84
NME9Q86XW9 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NME9Q86XW9 RETN-203ENST00000629642 400 ntTSL 5 BASIC20.28■□□□□ 0.84
NME9Q86XW9 Z98259.2-201ENST00000641583 609 ntBASIC20.28■□□□□ 0.84
NME9Q86XW9 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NME9Q86XW9 MROH4P-201ENST00000431302 1578 ntBASIC20.28■□□□□ 0.84
NME9Q86XW9 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NME9Q86XW9 AC008741.2-201ENST00000612792 3115 ntBASIC20.28■□□□□ 0.84
NME9Q86XW9 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
NME9Q86XW9 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NME9Q86XW9 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC20.28■□□□□ 0.84
NME9Q86XW9 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC20.28■□□□□ 0.84
NME9Q86XW9 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NME9Q86XW9 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC20.27■□□□□ 0.84
NME9Q86XW9 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NME9Q86XW9 AMT-239ENST00000636865 1914 ntTSL 5 BASIC20.27■□□□□ 0.84
NME9Q86XW9 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NME9Q86XW9 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
NME9Q86XW9 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NME9Q86XW9 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NME9Q86XW9 PGR-210ENST00000619228 3038 ntTSL 5 BASIC20.27■□□□□ 0.84
NME9Q86XW9 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms