Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 KRT8P31-201ENST00000504812 1408 ntBASIC9.15□□□□□ -0.94
VPS13BQ7Z7G8 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
VPS13BQ7Z7G8 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
VPS13BQ7Z7G8 PGR-210ENST00000619228 3038 ntTSL 5 BASIC9.15□□□□□ -0.94
VPS13BQ7Z7G8 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC9.15□□□□□ -0.94
VPS13BQ7Z7G8 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.94
VPS13BQ7Z7G8 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
VPS13BQ7Z7G8 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC9.15□□□□□ -0.94
VPS13BQ7Z7G8 AC018463.1-201ENST00000456674 917 ntBASIC9.15□□□□□ -0.94
VPS13BQ7Z7G8 NEU3-207ENST00000534628 746 ntTSL 2 BASIC9.15□□□□□ -0.94
VPS13BQ7Z7G8 CR383656.3-201ENST00000551315 183 ntBASIC9.15□□□□□ -0.94
VPS13BQ7Z7G8 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC9.15□□□□□ -0.94
VPS13BQ7Z7G8 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
VPS13BQ7Z7G8 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
VPS13BQ7Z7G8 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC9.15□□□□□ -0.95
VPS13BQ7Z7G8 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC9.15□□□□□ -0.95
VPS13BQ7Z7G8 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC9.15□□□□□ -0.95
VPS13BQ7Z7G8 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
VPS13BQ7Z7G8 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
VPS13BQ7Z7G8 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.95
VPS13BQ7Z7G8 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
VPS13BQ7Z7G8 LINC01101-201ENST00000622953 1884 ntBASIC9.15□□□□□ -0.95
VPS13BQ7Z7G8 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC9.15□□□□□ -0.95
VPS13BQ7Z7G8 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC9.15□□□□□ -0.95
VPS13BQ7Z7G8 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.95
VPS13BQ7Z7G8 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC9.15□□□□□ -0.95
VPS13BQ7Z7G8 TSPY25P-201ENST00000429463 745 ntBASIC9.15□□□□□ -0.95
VPS13BQ7Z7G8 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC9.15□□□□□ -0.95
VPS13BQ7Z7G8 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
VPS13BQ7Z7G8 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC9.15□□□□□ -0.95
VPS13BQ7Z7G8 AC093909.3-201ENST00000504783 336 ntBASIC9.15□□□□□ -0.95
VPS13BQ7Z7G8 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC9.15□□□□□ -0.95
VPS13BQ7Z7G8 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC9.15□□□□□ -0.95
VPS13BQ7Z7G8 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
VPS13BQ7Z7G8 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC9.15□□□□□ -0.95
VPS13BQ7Z7G8 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC9.15□□□□□ -0.95
VPS13BQ7Z7G8 NUDT4P2-201ENST00000578341 546 ntBASIC9.15□□□□□ -0.95
VPS13BQ7Z7G8 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC9.15□□□□□ -0.95
VPS13BQ7Z7G8 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.95
VPS13BQ7Z7G8 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
VPS13BQ7Z7G8 API5-203ENST00000455725 2257 ntTSL 2 BASIC9.14□□□□□ -0.95
VPS13BQ7Z7G8 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC9.14□□□□□ -0.95
VPS13BQ7Z7G8 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC9.14□□□□□ -0.95
VPS13BQ7Z7G8 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
VPS13BQ7Z7G8 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC9.14□□□□□ -0.95
VPS13BQ7Z7G8 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
VPS13BQ7Z7G8 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC9.14□□□□□ -0.95
VPS13BQ7Z7G8 USP4-203ENST00000415188 1454 ntTSL 3 BASIC9.14□□□□□ -0.95
VPS13BQ7Z7G8 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
VPS13BQ7Z7G8 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
VPS13BQ7Z7G8 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
VPS13BQ7Z7G8 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
VPS13BQ7Z7G8 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
VPS13BQ7Z7G8 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
VPS13BQ7Z7G8 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
VPS13BQ7Z7G8 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC9.14□□□□□ -0.95
VPS13BQ7Z7G8 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC9.14□□□□□ -0.95
VPS13BQ7Z7G8 FAM86KP-201ENST00000509817 987 ntBASIC9.14□□□□□ -0.95
VPS13BQ7Z7G8 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
VPS13BQ7Z7G8 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC9.14□□□□□ -0.95
VPS13BQ7Z7G8 AL590440.2-201ENST00000641973 1595 ntBASIC9.14□□□□□ -0.95
VPS13BQ7Z7G8 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
VPS13BQ7Z7G8 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
VPS13BQ7Z7G8 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
VPS13BQ7Z7G8 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC9.14□□□□□ -0.95
VPS13BQ7Z7G8 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC9.14□□□□□ -0.95
VPS13BQ7Z7G8 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
VPS13BQ7Z7G8 AC008894.3-201ENST00000624324 3103 ntBASIC9.14□□□□□ -0.95
VPS13BQ7Z7G8 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
VPS13BQ7Z7G8 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
VPS13BQ7Z7G8 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
VPS13BQ7Z7G8 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
VPS13BQ7Z7G8 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
VPS13BQ7Z7G8 PPT1-215ENST00000641471 2368 ntBASIC9.14□□□□□ -0.95
VPS13BQ7Z7G8 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
VPS13BQ7Z7G8 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
VPS13BQ7Z7G8 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
VPS13BQ7Z7G8 LINC00528-201ENST00000600723 2160 ntBASIC9.14□□□□□ -0.95
VPS13BQ7Z7G8 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC9.14□□□□□ -0.95
VPS13BQ7Z7G8 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
VPS13BQ7Z7G8 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
VPS13BQ7Z7G8 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
VPS13BQ7Z7G8 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC9.14□□□□□ -0.95
VPS13BQ7Z7G8 SIGLEC18P-201ENST00000602271 909 ntBASIC9.14□□□□□ -0.95
VPS13BQ7Z7G8 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC9.14□□□□□ -0.95
VPS13BQ7Z7G8 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
VPS13BQ7Z7G8 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
VPS13BQ7Z7G8 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
VPS13BQ7Z7G8 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
VPS13BQ7Z7G8 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC9.14□□□□□ -0.95
VPS13BQ7Z7G8 LILRP1-201ENST00000444199 1370 ntBASIC9.14□□□□□ -0.95
VPS13BQ7Z7G8 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC9.14□□□□□ -0.95
VPS13BQ7Z7G8 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
VPS13BQ7Z7G8 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
VPS13BQ7Z7G8 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
VPS13BQ7Z7G8 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
VPS13BQ7Z7G8 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
VPS13BQ7Z7G8 LCK-206ENST00000373564 2137 ntTSL 5 BASIC9.14□□□□□ -0.95
VPS13BQ7Z7G8 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
VPS13BQ7Z7G8 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms