Protein–RNA interactions for Protein: Q6ZSB3

LINC00299, Putative uncharacterized protein encoded by LINC00299, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00299Q6ZSB3 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00299Q6ZSB3 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00299Q6ZSB3 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.33□□□□□ -0.28
LINC00299Q6ZSB3 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC13.33□□□□□ -0.28
LINC00299Q6ZSB3 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC13.33□□□□□ -0.28
LINC00299Q6ZSB3 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC13.33□□□□□ -0.28
LINC00299Q6ZSB3 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC13.33□□□□□ -0.28
LINC00299Q6ZSB3 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
LINC00299Q6ZSB3 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00299Q6ZSB3 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00299Q6ZSB3 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC13.33□□□□□ -0.28
LINC00299Q6ZSB3 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00299Q6ZSB3 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00299Q6ZSB3 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.32□□□□□ -0.28
LINC00299Q6ZSB3 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC13.32□□□□□ -0.28
LINC00299Q6ZSB3 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
LINC00299Q6ZSB3 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC13.32□□□□□ -0.28
LINC00299Q6ZSB3 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00299Q6ZSB3 CICP1-201ENST00000416803 2410 ntBASIC13.32□□□□□ -0.28
LINC00299Q6ZSB3 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00299Q6ZSB3 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00299Q6ZSB3 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
LINC00299Q6ZSB3 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00299Q6ZSB3 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00299Q6ZSB3 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00299Q6ZSB3 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC13.32□□□□□ -0.28
LINC00299Q6ZSB3 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC13.32□□□□□ -0.28
LINC00299Q6ZSB3 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC13.32□□□□□ -0.28
LINC00299Q6ZSB3 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00299Q6ZSB3 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
LINC00299Q6ZSB3 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00299Q6ZSB3 AL391647.1-201ENST00000395664 511 ntBASIC13.32□□□□□ -0.28
LINC00299Q6ZSB3 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00299Q6ZSB3 FAM185BP-201ENST00000443595 716 ntBASIC13.32□□□□□ -0.28
LINC00299Q6ZSB3 ATP5G1P1-201ENST00000448724 379 ntBASIC13.32□□□□□ -0.28
LINC00299Q6ZSB3 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00299Q6ZSB3 AC106795.1-205ENST00000512851 1056 ntBASIC13.32□□□□□ -0.28
LINC00299Q6ZSB3 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
LINC00299Q6ZSB3 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC13.32□□□□□ -0.28
LINC00299Q6ZSB3 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00299Q6ZSB3 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC13.32□□□□□ -0.28
LINC00299Q6ZSB3 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC13.32□□□□□ -0.28
LINC00299Q6ZSB3 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC13.32□□□□□ -0.28
LINC00299Q6ZSB3 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC13.32□□□□□ -0.28
LINC00299Q6ZSB3 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00299Q6ZSB3 GOLGA8IP-202ENST00000611635 2100 ntBASIC13.32□□□□□ -0.28
LINC00299Q6ZSB3 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.32□□□□□ -0.28
LINC00299Q6ZSB3 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.32□□□□□ -0.28
LINC00299Q6ZSB3 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
LINC00299Q6ZSB3 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC13.32□□□□□ -0.28
LINC00299Q6ZSB3 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
LINC00299Q6ZSB3 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00299Q6ZSB3 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00299Q6ZSB3 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC13.32□□□□□ -0.28
LINC00299Q6ZSB3 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00299Q6ZSB3 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00299Q6ZSB3 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC13.32□□□□□ -0.28
LINC00299Q6ZSB3 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00299Q6ZSB3 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00299Q6ZSB3 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00299Q6ZSB3 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00299Q6ZSB3 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00299Q6ZSB3 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC13.32□□□□□ -0.28
LINC00299Q6ZSB3 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
LINC00299Q6ZSB3 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00299Q6ZSB3 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00299Q6ZSB3 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
LINC00299Q6ZSB3 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC13.32□□□□□ -0.28
LINC00299Q6ZSB3 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
LINC00299Q6ZSB3 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC13.32□□□□□ -0.28
LINC00299Q6ZSB3 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC13.32□□□□□ -0.28
LINC00299Q6ZSB3 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00299Q6ZSB3 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00299Q6ZSB3 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC13.32□□□□□ -0.28
LINC00299Q6ZSB3 AC215219.1-201ENST00000400706 1817 ntBASIC13.32□□□□□ -0.28
LINC00299Q6ZSB3 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC00299Q6ZSB3 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC13.31□□□□□ -0.28
LINC00299Q6ZSB3 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC13.31□□□□□ -0.28
LINC00299Q6ZSB3 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00299Q6ZSB3 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
LINC00299Q6ZSB3 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00299Q6ZSB3 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00299Q6ZSB3 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC13.31□□□□□ -0.28
LINC00299Q6ZSB3 AGAP10P-201ENST00000454844 2418 ntBASIC13.31□□□□□ -0.28
LINC00299Q6ZSB3 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC13.31□□□□□ -0.28
LINC00299Q6ZSB3 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00299Q6ZSB3 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.31□□□□□ -0.28
LINC00299Q6ZSB3 AL133387.2-201ENST00000422661 2222 ntTSL 2 BASIC13.31□□□□□ -0.28
LINC00299Q6ZSB3 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00299Q6ZSB3 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00299Q6ZSB3 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00299Q6ZSB3 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
LINC00299Q6ZSB3 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00299Q6ZSB3 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00299Q6ZSB3 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00299Q6ZSB3 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC13.31□□□□□ -0.28
LINC00299Q6ZSB3 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00299Q6ZSB3 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
LINC00299Q6ZSB3 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00299Q6ZSB3 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms