Protein–RNA interactions for Protein: Q53S08

RAB6C, Rab6C, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6CQ53S08 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAB6CQ53S08 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
RAB6CQ53S08 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RAB6CQ53S08 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC15.81■□□□□ 0.12
RAB6CQ53S08 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAB6CQ53S08 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
RAB6CQ53S08 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
RAB6CQ53S08 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAB6CQ53S08 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAB6CQ53S08 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RAB6CQ53S08 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAB6CQ53S08 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAB6CQ53S08 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
RAB6CQ53S08 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RAB6CQ53S08 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAB6CQ53S08 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAB6CQ53S08 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
RAB6CQ53S08 AL645937.2-201ENST00000396808 931 ntBASIC15.81■□□□□ 0.12
RAB6CQ53S08 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAB6CQ53S08 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC15.81■□□□□ 0.12
RAB6CQ53S08 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RAB6CQ53S08 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
RAB6CQ53S08 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC15.81■□□□□ 0.12
RAB6CQ53S08 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
RAB6CQ53S08 AC022137.2-201ENST00000503482 481 ntBASIC15.81■□□□□ 0.12
RAB6CQ53S08 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAB6CQ53S08 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RAB6CQ53S08 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC15.81■□□□□ 0.12
RAB6CQ53S08 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAB6CQ53S08 TDH-203ENST00000531764 1110 ntBASIC15.81■□□□□ 0.12
RAB6CQ53S08 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RAB6CQ53S08 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.81■□□□□ 0.12
RAB6CQ53S08 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RAB6CQ53S08 AC023908.3-201ENST00000564211 3047 ntBASIC15.81■□□□□ 0.12
RAB6CQ53S08 KSR1-207ENST00000578981 748 ntTSL 4 BASIC15.81■□□□□ 0.12
RAB6CQ53S08 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
RAB6CQ53S08 LINC01101-201ENST00000622953 1884 ntBASIC15.81■□□□□ 0.12
RAB6CQ53S08 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC15.81■□□□□ 0.12
RAB6CQ53S08 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RAB6CQ53S08 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAB6CQ53S08 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAB6CQ53S08 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC15.81■□□□□ 0.12
RAB6CQ53S08 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
RAB6CQ53S08 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RAB6CQ53S08 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RAB6CQ53S08 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
RAB6CQ53S08 AC018442.1-201ENST00000421439 2061 ntBASIC15.8■□□□□ 0.12
RAB6CQ53S08 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB6CQ53S08 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RAB6CQ53S08 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB6CQ53S08 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC15.8■□□□□ 0.12
RAB6CQ53S08 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RAB6CQ53S08 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB6CQ53S08 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC15.8■□□□□ 0.12
RAB6CQ53S08 AC055811.4-201ENST00000624039 1754 ntBASIC15.8■□□□□ 0.12
RAB6CQ53S08 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RAB6CQ53S08 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RAB6CQ53S08 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC15.8■□□□□ 0.12
RAB6CQ53S08 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.8■□□□□ 0.12
RAB6CQ53S08 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
RAB6CQ53S08 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC15.8■□□□□ 0.12
RAB6CQ53S08 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.8■□□□□ 0.12
RAB6CQ53S08 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC15.8■□□□□ 0.12
RAB6CQ53S08 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB6CQ53S08 ACTG1P3-201ENST00000431775 1114 ntBASIC15.8■□□□□ 0.12
RAB6CQ53S08 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB6CQ53S08 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC15.8■□□□□ 0.12
RAB6CQ53S08 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RAB6CQ53S08 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB6CQ53S08 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC15.8■□□□□ 0.12
RAB6CQ53S08 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC15.8■□□□□ 0.12
RAB6CQ53S08 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC15.8■□□□□ 0.12
RAB6CQ53S08 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC15.8■□□□□ 0.12
RAB6CQ53S08 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.8■□□□□ 0.12
RAB6CQ53S08 AP005019.2-201ENST00000615104 511 ntBASIC15.8■□□□□ 0.12
RAB6CQ53S08 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB6CQ53S08 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB6CQ53S08 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
RAB6CQ53S08 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.8■□□□□ 0.12
RAB6CQ53S08 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
RAB6CQ53S08 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
RAB6CQ53S08 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB6CQ53S08 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
RAB6CQ53S08 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RAB6CQ53S08 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC15.8■□□□□ 0.12
RAB6CQ53S08 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB6CQ53S08 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RAB6CQ53S08 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
RAB6CQ53S08 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB6CQ53S08 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
RAB6CQ53S08 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB6CQ53S08 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
RAB6CQ53S08 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RAB6CQ53S08 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RAB6CQ53S08 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB6CQ53S08 AC097359.2-201ENST00000604992 2389 ntBASIC15.79■□□□□ 0.12
RAB6CQ53S08 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
RAB6CQ53S08 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB6CQ53S08 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
RAB6CQ53S08 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms