Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC27Q2M243 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC27Q2M243 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
CCDC27Q2M243 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC27Q2M243 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
CCDC27Q2M243 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CCDC27Q2M243 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
CCDC27Q2M243 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC27Q2M243 AL390755.1-201ENST00000623716 2027 ntBASIC19.73■□□□□ 0.75
CCDC27Q2M243 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC19.73■□□□□ 0.75
CCDC27Q2M243 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC27Q2M243 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC27Q2M243 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC27Q2M243 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC27Q2M243 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC27Q2M243 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC19.73■□□□□ 0.75
CCDC27Q2M243 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC19.73■□□□□ 0.75
CCDC27Q2M243 AP000812.2-201ENST00000538934 718 ntBASIC19.73■□□□□ 0.75
CCDC27Q2M243 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
CCDC27Q2M243 KRT90P-201ENST00000549264 1064 ntBASIC19.73■□□□□ 0.75
CCDC27Q2M243 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC19.73■□□□□ 0.75
CCDC27Q2M243 ORC6-206ENST00000568364 888 ntTSL 5 BASIC19.73■□□□□ 0.75
CCDC27Q2M243 AC138696.2-201ENST00000607376 223 ntBASIC19.73■□□□□ 0.75
CCDC27Q2M243 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
CCDC27Q2M243 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC27Q2M243 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC27Q2M243 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC19.73■□□□□ 0.75
CCDC27Q2M243 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC27Q2M243 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC27Q2M243 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC27Q2M243 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC27Q2M243 AC063926.2-201ENST00000623766 1308 ntBASIC19.73■□□□□ 0.75
CCDC27Q2M243 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC19.73■□□□□ 0.75
CCDC27Q2M243 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC27Q2M243 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC27Q2M243 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC27Q2M243 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
CCDC27Q2M243 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC27Q2M243 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC27Q2M243 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC27Q2M243 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC19.72■□□□□ 0.75
CCDC27Q2M243 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC19.72■□□□□ 0.75
CCDC27Q2M243 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CCDC27Q2M243 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC27Q2M243 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC27Q2M243 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC27Q2M243 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC27Q2M243 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC27Q2M243 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC27Q2M243 ZBTB12BP-201ENST00000314232 1122 ntBASIC19.72■□□□□ 0.75
CCDC27Q2M243 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC27Q2M243 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CCDC27Q2M243 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
CCDC27Q2M243 AC016694.1-201ENST00000434179 700 ntBASIC19.72■□□□□ 0.75
CCDC27Q2M243 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC27Q2M243 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC27Q2M243 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC27Q2M243 RNA5SP486-201ENST00000515961 83 ntBASIC19.72■□□□□ 0.75
CCDC27Q2M243 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC19.72■□□□□ 0.75
CCDC27Q2M243 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC19.72■□□□□ 0.75
CCDC27Q2M243 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC27Q2M243 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC19.72■□□□□ 0.75
CCDC27Q2M243 AC138466.3-201ENST00000619983 221 ntBASIC19.72■□□□□ 0.75
CCDC27Q2M243 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC27Q2M243 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC27Q2M243 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC27Q2M243 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC27Q2M243 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CCDC27Q2M243 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC27Q2M243 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC27Q2M243 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC27Q2M243 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC27Q2M243 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC27Q2M243 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC27Q2M243 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC19.71■□□□□ 0.75
CCDC27Q2M243 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC27Q2M243 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC27Q2M243 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CCDC27Q2M243 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC27Q2M243 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC27Q2M243 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC27Q2M243 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC27Q2M243 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC19.71■□□□□ 0.75
CCDC27Q2M243 AC007551.1-201ENST00000457394 519 ntBASIC19.71■□□□□ 0.75
CCDC27Q2M243 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CCDC27Q2M243 NAA50-208ENST00000497255 789 ntTSL 5 BASIC19.71■□□□□ 0.75
CCDC27Q2M243 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC27Q2M243 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CCDC27Q2M243 AC244669.2-201ENST00000612320 853 ntBASIC19.71■□□□□ 0.75
CCDC27Q2M243 AL035252.4-201ENST00000624174 288 ntBASIC19.71■□□□□ 0.75
CCDC27Q2M243 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC27Q2M243 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC27Q2M243 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC27Q2M243 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC27Q2M243 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC27Q2M243 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC27Q2M243 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC27Q2M243 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC27Q2M243 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC27Q2M243 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms