Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RSPO4Q2I0M5 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC14.63□□□□□ -0.07
RSPO4Q2I0M5 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC14.63□□□□□ -0.07
RSPO4Q2I0M5 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RSPO4Q2I0M5 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RSPO4Q2I0M5 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RSPO4Q2I0M5 AC018892.3-201ENST00000623986 2499 ntBASIC14.63□□□□□ -0.07
RSPO4Q2I0M5 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
RSPO4Q2I0M5 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.62□□□□□ -0.07
RSPO4Q2I0M5 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RSPO4Q2I0M5 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
RSPO4Q2I0M5 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC14.62□□□□□ -0.07
RSPO4Q2I0M5 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC14.62□□□□□ -0.07
RSPO4Q2I0M5 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RSPO4Q2I0M5 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RSPO4Q2I0M5 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC14.62□□□□□ -0.07
RSPO4Q2I0M5 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RSPO4Q2I0M5 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.62□□□□□ -0.07
RSPO4Q2I0M5 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
RSPO4Q2I0M5 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RSPO4Q2I0M5 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RSPO4Q2I0M5 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RSPO4Q2I0M5 COX20P1-201ENST00000366529 357 ntBASIC14.62□□□□□ -0.07
RSPO4Q2I0M5 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RSPO4Q2I0M5 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RSPO4Q2I0M5 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RSPO4Q2I0M5 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RSPO4Q2I0M5 AL357563.1-201ENST00000404728 395 ntBASIC14.62□□□□□ -0.07
RSPO4Q2I0M5 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RSPO4Q2I0M5 GCSHP3-201ENST00000431120 391 ntBASIC14.62□□□□□ -0.07
RSPO4Q2I0M5 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC14.62□□□□□ -0.07
RSPO4Q2I0M5 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
RSPO4Q2I0M5 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC14.62□□□□□ -0.07
RSPO4Q2I0M5 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC14.62□□□□□ -0.07
RSPO4Q2I0M5 FAM86B3P-203ENST00000523992 854 ntBASIC14.62□□□□□ -0.07
RSPO4Q2I0M5 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC14.62□□□□□ -0.07
RSPO4Q2I0M5 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
RSPO4Q2I0M5 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC14.62□□□□□ -0.07
RSPO4Q2I0M5 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC14.62□□□□□ -0.07
RSPO4Q2I0M5 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
RSPO4Q2I0M5 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
RSPO4Q2I0M5 AC025262.2-201ENST00000623975 1056 ntBASIC14.62□□□□□ -0.07
RSPO4Q2I0M5 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC14.62□□□□□ -0.07
RSPO4Q2I0M5 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RSPO4Q2I0M5 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RSPO4Q2I0M5 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RSPO4Q2I0M5 FKBP4P6-201ENST00000457486 1332 ntBASIC14.62□□□□□ -0.07
RSPO4Q2I0M5 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RSPO4Q2I0M5 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
RSPO4Q2I0M5 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RSPO4Q2I0M5 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.62□□□□□ -0.07
RSPO4Q2I0M5 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC14.62□□□□□ -0.07
RSPO4Q2I0M5 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RSPO4Q2I0M5 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.61□□□□□ -0.07
RSPO4Q2I0M5 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RSPO4Q2I0M5 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
RSPO4Q2I0M5 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.61□□□□□ -0.07
RSPO4Q2I0M5 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.61□□□□□ -0.07
RSPO4Q2I0M5 SHC1P1-201ENST00000425230 1745 ntBASIC14.61□□□□□ -0.07
RSPO4Q2I0M5 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.61□□□□□ -0.07
RSPO4Q2I0M5 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
RSPO4Q2I0M5 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RSPO4Q2I0M5 FUK-207ENST00000571514 3054 ntTSL 2 BASIC14.61□□□□□ -0.07
RSPO4Q2I0M5 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RSPO4Q2I0M5 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC14.61□□□□□ -0.07
RSPO4Q2I0M5 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RSPO4Q2I0M5 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
RSPO4Q2I0M5 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RSPO4Q2I0M5 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RSPO4Q2I0M5 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
RSPO4Q2I0M5 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
RSPO4Q2I0M5 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RSPO4Q2I0M5 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
RSPO4Q2I0M5 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC14.61□□□□□ -0.07
RSPO4Q2I0M5 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
RSPO4Q2I0M5 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC14.61□□□□□ -0.07
RSPO4Q2I0M5 IGHEP1-201ENST00000521393 651 ntBASIC14.61□□□□□ -0.07
RSPO4Q2I0M5 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RSPO4Q2I0M5 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC14.61□□□□□ -0.07
RSPO4Q2I0M5 AC093752.3-201ENST00000567343 901 ntBASIC14.61□□□□□ -0.07
RSPO4Q2I0M5 PTPN20CP-201ENST00000614090 920 ntBASIC14.61□□□□□ -0.07
RSPO4Q2I0M5 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC14.61□□□□□ -0.07
RSPO4Q2I0M5 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RSPO4Q2I0M5 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC14.61□□□□□ -0.07
RSPO4Q2I0M5 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RSPO4Q2I0M5 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RSPO4Q2I0M5 FRMPD2B-201ENST00000431305 1347 ntBASIC14.61□□□□□ -0.07
RSPO4Q2I0M5 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.61□□□□□ -0.07
RSPO4Q2I0M5 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
RSPO4Q2I0M5 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
RSPO4Q2I0M5 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RSPO4Q2I0M5 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.61□□□□□ -0.07
RSPO4Q2I0M5 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RSPO4Q2I0M5 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
RSPO4Q2I0M5 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
RSPO4Q2I0M5 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
RSPO4Q2I0M5 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RSPO4Q2I0M5 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RSPO4Q2I0M5 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RSPO4Q2I0M5 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms