Protein–RNA interactions for Protein: Q12772

SREBF2, Sterol regulatory element-binding protein 2, humanhuman

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2Q12772 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
SREBF2Q12772 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SREBF2Q12772 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC17.15■□□□□ 0.34
SREBF2Q12772 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SREBF2Q12772 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SREBF2Q12772 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SREBF2Q12772 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
SREBF2Q12772 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SREBF2Q12772 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SREBF2Q12772 CYP4F23P-201ENST00000593402 1579 ntBASIC17.15■□□□□ 0.34
SREBF2Q12772 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC17.14■□□□□ 0.34
SREBF2Q12772 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
SREBF2Q12772 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
SREBF2Q12772 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SREBF2Q12772 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
SREBF2Q12772 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
SREBF2Q12772 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.14■□□□□ 0.33
SREBF2Q12772 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
SREBF2Q12772 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
SREBF2Q12772 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
SREBF2Q12772 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SREBF2Q12772 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SREBF2Q12772 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SREBF2Q12772 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
SREBF2Q12772 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
SREBF2Q12772 CR383656.3-201ENST00000551315 183 ntBASIC17.14■□□□□ 0.33
SREBF2Q12772 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC17.14■□□□□ 0.33
SREBF2Q12772 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
SREBF2Q12772 AC027237.1-201ENST00000560942 655 ntBASIC17.14■□□□□ 0.33
SREBF2Q12772 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
SREBF2Q12772 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SREBF2Q12772 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
SREBF2Q12772 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SREBF2Q12772 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SREBF2Q12772 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SREBF2Q12772 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
SREBF2Q12772 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.14■□□□□ 0.33
SREBF2Q12772 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SREBF2Q12772 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SREBF2Q12772 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
SREBF2Q12772 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SREBF2Q12772 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SREBF2Q12772 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.13■□□□□ 0.33
SREBF2Q12772 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.13■□□□□ 0.33
SREBF2Q12772 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SREBF2Q12772 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SREBF2Q12772 LINC01815-202ENST00000641468 1409 ntBASIC17.13■□□□□ 0.33
SREBF2Q12772 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SREBF2Q12772 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SREBF2Q12772 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SREBF2Q12772 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
SREBF2Q12772 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
SREBF2Q12772 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.13■□□□□ 0.33
SREBF2Q12772 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC17.13■□□□□ 0.33
SREBF2Q12772 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SREBF2Q12772 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
SREBF2Q12772 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SREBF2Q12772 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SREBF2Q12772 RNA5SP359-201ENST00000364838 113 ntBASIC17.13■□□□□ 0.33
SREBF2Q12772 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
SREBF2Q12772 HLA-DMA-203ENST00000395305 777 ntBASIC17.13■□□□□ 0.33
SREBF2Q12772 TLE1P1-201ENST00000422965 589 ntBASIC17.13■□□□□ 0.33
SREBF2Q12772 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC17.13■□□□□ 0.33
SREBF2Q12772 RPS23-204ENST00000507980 836 ntTSL 2 BASIC17.13■□□□□ 0.33
SREBF2Q12772 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC17.13■□□□□ 0.33
SREBF2Q12772 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC17.13■□□□□ 0.33
SREBF2Q12772 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
SREBF2Q12772 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC17.13■□□□□ 0.33
SREBF2Q12772 AP000322.3-201ENST00000608665 388 ntBASIC17.13■□□□□ 0.33
SREBF2Q12772 AC006158.1-201ENST00000610661 249 ntBASIC17.13■□□□□ 0.33
SREBF2Q12772 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC17.13■□□□□ 0.33
SREBF2Q12772 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SREBF2Q12772 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.13■□□□□ 0.33
SREBF2Q12772 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
SREBF2Q12772 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
SREBF2Q12772 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.13■□□□□ 0.33
SREBF2Q12772 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
SREBF2Q12772 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SREBF2Q12772 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SREBF2Q12772 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC17.13■□□□□ 0.33
SREBF2Q12772 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
SREBF2Q12772 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
SREBF2Q12772 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
SREBF2Q12772 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SREBF2Q12772 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
SREBF2Q12772 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SREBF2Q12772 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC17.12■□□□□ 0.33
SREBF2Q12772 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SREBF2Q12772 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SREBF2Q12772 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SREBF2Q12772 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SREBF2Q12772 LINC02447-202ENST00000501888 2146 ntBASIC17.12■□□□□ 0.33
SREBF2Q12772 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SREBF2Q12772 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
SREBF2Q12772 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SREBF2Q12772 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.12■□□□□ 0.33
SREBF2Q12772 MTHFR-217ENST00000641820 1569 ntBASIC17.12■□□□□ 0.33
SREBF2Q12772 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SREBF2Q12772 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SREBF2Q12772 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms