Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.25□□□□□ -0.13
CD47Q08722 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
CD47Q08722 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CD47Q08722 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CD47Q08722 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.25□□□□□ -0.13
CD47Q08722 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.25□□□□□ -0.13
CD47Q08722 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CD47Q08722 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.24□□□□□ -0.13
CD47Q08722 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CD47Q08722 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CD47Q08722 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
CD47Q08722 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC14.24□□□□□ -0.13
CD47Q08722 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
CD47Q08722 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
CD47Q08722 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
CD47Q08722 AC011474.4-201ENST00000623523 2076 ntBASIC14.24□□□□□ -0.13
CD47Q08722 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CD47Q08722 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CD47Q08722 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC14.24□□□□□ -0.13
CD47Q08722 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC14.24□□□□□ -0.13
CD47Q08722 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CD47Q08722 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC14.24□□□□□ -0.13
CD47Q08722 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CD47Q08722 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CD47Q08722 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.24□□□□□ -0.13
CD47Q08722 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CD47Q08722 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CD47Q08722 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CD47Q08722 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CD47Q08722 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
CD47Q08722 AL353705.2-201ENST00000428243 662 ntBASIC14.24□□□□□ -0.13
CD47Q08722 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC14.24□□□□□ -0.13
CD47Q08722 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC14.24□□□□□ -0.13
CD47Q08722 YBX1P5-201ENST00000509441 847 ntBASIC14.24□□□□□ -0.13
CD47Q08722 AP000344.2-201ENST00000512987 629 ntBASIC14.24□□□□□ -0.13
CD47Q08722 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.24□□□□□ -0.13
CD47Q08722 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC14.24□□□□□ -0.13
CD47Q08722 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC14.24□□□□□ -0.13
CD47Q08722 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC14.24□□□□□ -0.13
CD47Q08722 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
CD47Q08722 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC14.24□□□□□ -0.13
CD47Q08722 AL513210.1-201ENST00000629608 234 ntBASIC14.24□□□□□ -0.13
CD47Q08722 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
CD47Q08722 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CD47Q08722 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
CD47Q08722 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CD47Q08722 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.24□□□□□ -0.13
CD47Q08722 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CD47Q08722 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC14.24□□□□□ -0.13
CD47Q08722 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CD47Q08722 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.24□□□□□ -0.13
CD47Q08722 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC14.24□□□□□ -0.13
CD47Q08722 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CD47Q08722 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CD47Q08722 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CD47Q08722 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.24□□□□□ -0.13
CD47Q08722 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.24□□□□□ -0.13
CD47Q08722 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
CD47Q08722 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CD47Q08722 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CD47Q08722 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CD47Q08722 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
CD47Q08722 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CD47Q08722 AC015802.1-201ENST00000588104 1449 ntBASIC14.24□□□□□ -0.13
CD47Q08722 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.24□□□□□ -0.13
CD47Q08722 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CD47Q08722 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CD47Q08722 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
CD47Q08722 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
CD47Q08722 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
CD47Q08722 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CD47Q08722 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CD47Q08722 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CD47Q08722 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
CD47Q08722 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC14.23□□□□□ -0.13
CD47Q08722 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC14.23□□□□□ -0.13
CD47Q08722 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CD47Q08722 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CD47Q08722 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CD47Q08722 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CD47Q08722 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CD47Q08722 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CD47Q08722 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CD47Q08722 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CD47Q08722 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC14.23□□□□□ -0.13
CD47Q08722 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CD47Q08722 AC004461.1-201ENST00000412461 403 ntBASIC14.23□□□□□ -0.13
CD47Q08722 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC14.23□□□□□ -0.13
CD47Q08722 AL627223.1-201ENST00000416693 442 ntBASIC14.23□□□□□ -0.13
CD47Q08722 UPF3AP3-201ENST00000420996 769 ntBASIC14.23□□□□□ -0.13
CD47Q08722 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC14.23□□□□□ -0.13
CD47Q08722 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC14.23□□□□□ -0.13
CD47Q08722 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.23□□□□□ -0.13
CD47Q08722 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CD47Q08722 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.23□□□□□ -0.13
CD47Q08722 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.23□□□□□ -0.13
CD47Q08722 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.23□□□□□ -0.13
CD47Q08722 AC084121.4-201ENST00000641598 221 ntBASIC14.23□□□□□ -0.13
CD47Q08722 AF228730.8-201ENST00000642140 221 ntBASIC14.23□□□□□ -0.13
CD47Q08722 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms