Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBA52P62987 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBA52P62987 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBA52P62987 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBA52P62987 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBA52P62987 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBA52P62987 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBA52P62987 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
UBA52P62987 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC13.28□□□□□ -0.28
UBA52P62987 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
UBA52P62987 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBA52P62987 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBA52P62987 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
UBA52P62987 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBA52P62987 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBA52P62987 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
UBA52P62987 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBA52P62987 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
UBA52P62987 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC13.27□□□□□ -0.28
UBA52P62987 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
UBA52P62987 AC092127.1-201ENST00000567093 3455 ntBASIC13.27□□□□□ -0.28
UBA52P62987 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
UBA52P62987 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC13.27□□□□□ -0.28
UBA52P62987 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
UBA52P62987 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
UBA52P62987 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
UBA52P62987 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.28
UBA52P62987 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
UBA52P62987 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
UBA52P62987 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
UBA52P62987 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
UBA52P62987 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
UBA52P62987 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
UBA52P62987 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
UBA52P62987 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
UBA52P62987 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
UBA52P62987 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
UBA52P62987 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC13.27□□□□□ -0.28
UBA52P62987 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
UBA52P62987 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
UBA52P62987 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
UBA52P62987 CALY-202ENST00000368555 783 ntTSL 2 BASIC13.27□□□□□ -0.29
UBA52P62987 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
UBA52P62987 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC13.27□□□□□ -0.29
UBA52P62987 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC13.27□□□□□ -0.29
UBA52P62987 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
UBA52P62987 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
UBA52P62987 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC13.27□□□□□ -0.29
UBA52P62987 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC13.27□□□□□ -0.29
UBA52P62987 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC13.27□□□□□ -0.29
UBA52P62987 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
UBA52P62987 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.27□□□□□ -0.29
UBA52P62987 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC13.27□□□□□ -0.29
UBA52P62987 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC13.27□□□□□ -0.29
UBA52P62987 CYP2A7P1-201ENST00000595391 815 ntBASIC13.27□□□□□ -0.29
UBA52P62987 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
UBA52P62987 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
UBA52P62987 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
UBA52P62987 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
UBA52P62987 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
UBA52P62987 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
UBA52P62987 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
UBA52P62987 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
UBA52P62987 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.29
UBA52P62987 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
UBA52P62987 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC13.27□□□□□ -0.29
UBA52P62987 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
UBA52P62987 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.27□□□□□ -0.29
UBA52P62987 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC13.27□□□□□ -0.29
UBA52P62987 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC13.27□□□□□ -0.29
UBA52P62987 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
UBA52P62987 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
UBA52P62987 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
UBA52P62987 SLC9A3P2-201ENST00000447821 2021 ntBASIC13.27□□□□□ -0.29
UBA52P62987 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC13.27□□□□□ -0.29
UBA52P62987 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
UBA52P62987 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.27□□□□□ -0.29
UBA52P62987 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC13.27□□□□□ -0.29
UBA52P62987 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
UBA52P62987 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
UBA52P62987 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
UBA52P62987 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
UBA52P62987 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC13.27□□□□□ -0.29
UBA52P62987 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBA52P62987 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBA52P62987 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
UBA52P62987 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBA52P62987 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
UBA52P62987 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
UBA52P62987 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
UBA52P62987 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBA52P62987 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
UBA52P62987 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
UBA52P62987 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBA52P62987 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBA52P62987 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC13.26□□□□□ -0.29
UBA52P62987 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
UBA52P62987 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBA52P62987 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBA52P62987 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms