Protein–RNA interactions for Protein: P61129

ZC3H6, Zinc finger CCCH domain-containing protein 6, humanhuman

Known RBP Predictions only

Length 1,189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H6P61129 MIR6720-201ENST00000611664 98 ntBASIC20.08■□□□□ 0.81
ZC3H6P61129 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
ZC3H6P61129 AL157813.1-201ENST00000612996 587 ntBASIC20.08■□□□□ 0.81
ZC3H6P61129 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ZC3H6P61129 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
ZC3H6P61129 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
ZC3H6P61129 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
ZC3H6P61129 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC20.08■□□□□ 0.8
ZC3H6P61129 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.8
ZC3H6P61129 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
ZC3H6P61129 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
ZC3H6P61129 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
ZC3H6P61129 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
ZC3H6P61129 FAM90A2P-201ENST00000511144 1395 ntBASIC20.08■□□□□ 0.8
ZC3H6P61129 FAM90A25P-201ENST00000528404 1395 ntBASIC20.08■□□□□ 0.8
ZC3H6P61129 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
ZC3H6P61129 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
ZC3H6P61129 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC20.07■□□□□ 0.8
ZC3H6P61129 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
ZC3H6P61129 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ZC3H6P61129 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZC3H6P61129 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZC3H6P61129 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZC3H6P61129 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZC3H6P61129 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZC3H6P61129 RPL7P35-201ENST00000446943 740 ntBASIC20.07■□□□□ 0.8
ZC3H6P61129 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC20.07■□□□□ 0.8
ZC3H6P61129 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC20.07■□□□□ 0.8
ZC3H6P61129 AC008723.1-201ENST00000506922 207 ntBASIC20.07■□□□□ 0.8
ZC3H6P61129 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC20.07■□□□□ 0.8
ZC3H6P61129 PTK2-225ENST00000520892 571 ntTSL 4 BASIC20.07■□□□□ 0.8
ZC3H6P61129 CCNC-217ENST00000523985 958 ntTSL 2 BASIC20.07■□□□□ 0.8
ZC3H6P61129 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC20.07■□□□□ 0.8
ZC3H6P61129 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC20.07■□□□□ 0.8
ZC3H6P61129 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ZC3H6P61129 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ZC3H6P61129 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC20.07■□□□□ 0.8
ZC3H6P61129 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC20.07■□□□□ 0.8
ZC3H6P61129 RPS15-202ENST00000585665 467 ntTSL 3 BASIC20.07■□□□□ 0.8
ZC3H6P61129 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
ZC3H6P61129 AC007881.3-201ENST00000608897 607 ntBASIC20.07■□□□□ 0.8
ZC3H6P61129 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZC3H6P61129 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC20.07■□□□□ 0.8
ZC3H6P61129 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZC3H6P61129 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ZC3H6P61129 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
ZC3H6P61129 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ZC3H6P61129 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
ZC3H6P61129 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZC3H6P61129 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ZC3H6P61129 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZC3H6P61129 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC20.07■□□□□ 0.8
ZC3H6P61129 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZC3H6P61129 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC20.07■□□□□ 0.8
ZC3H6P61129 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ZC3H6P61129 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
ZC3H6P61129 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZC3H6P61129 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC20.06■□□□□ 0.8
ZC3H6P61129 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZC3H6P61129 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZC3H6P61129 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
ZC3H6P61129 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZC3H6P61129 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
ZC3H6P61129 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
ZC3H6P61129 AL512430.1-201ENST00000392575 860 ntBASIC20.06■□□□□ 0.8
ZC3H6P61129 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZC3H6P61129 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ZC3H6P61129 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC20.06■□□□□ 0.8
ZC3H6P61129 AC008825.2-201ENST00000603374 718 ntBASIC20.06■□□□□ 0.8
ZC3H6P61129 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC20.06■□□□□ 0.8
ZC3H6P61129 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZC3H6P61129 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZC3H6P61129 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC20.06■□□□□ 0.8
ZC3H6P61129 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZC3H6P61129 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZC3H6P61129 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZC3H6P61129 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
ZC3H6P61129 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC20.06■□□□□ 0.8
ZC3H6P61129 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZC3H6P61129 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZC3H6P61129 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZC3H6P61129 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC20.06■□□□□ 0.8
ZC3H6P61129 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC20.06■□□□□ 0.8
ZC3H6P61129 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZC3H6P61129 RAN-210ENST00000541630 1475 ntTSL 2 BASIC20.05■□□□□ 0.8
ZC3H6P61129 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ZC3H6P61129 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
ZC3H6P61129 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ZC3H6P61129 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
ZC3H6P61129 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZC3H6P61129 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
ZC3H6P61129 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
ZC3H6P61129 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZC3H6P61129 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZC3H6P61129 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
ZC3H6P61129 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC20.05■□□□□ 0.8
ZC3H6P61129 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZC3H6P61129 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ZC3H6P61129 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZC3H6P61129 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms