Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLDN20P56880 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLDN20P56880 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC14.04□□□□□ -0.16
CLDN20P56880 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CLDN20P56880 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CLDN20P56880 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CLDN20P56880 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CLDN20P56880 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLDN20P56880 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.04□□□□□ -0.16
CLDN20P56880 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.04□□□□□ -0.16
CLDN20P56880 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CLDN20P56880 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14.04□□□□□ -0.16
CLDN20P56880 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC14.04□□□□□ -0.16
CLDN20P56880 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC14.04□□□□□ -0.16
CLDN20P56880 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CLDN20P56880 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC14.04□□□□□ -0.16
CLDN20P56880 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.04□□□□□ -0.16
CLDN20P56880 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.04□□□□□ -0.16
CLDN20P56880 TMEM261P1-201ENST00000604899 340 ntBASIC14.04□□□□□ -0.16
CLDN20P56880 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC14.04□□□□□ -0.16
CLDN20P56880 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLDN20P56880 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLDN20P56880 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLDN20P56880 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLDN20P56880 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.04□□□□□ -0.16
CLDN20P56880 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLDN20P56880 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CLDN20P56880 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLDN20P56880 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.04□□□□□ -0.16
CLDN20P56880 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLDN20P56880 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.04□□□□□ -0.16
CLDN20P56880 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLDN20P56880 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.04□□□□□ -0.16
CLDN20P56880 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLDN20P56880 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC14.04□□□□□ -0.16
CLDN20P56880 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLDN20P56880 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLDN20P56880 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CLDN20P56880 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.04□□□□□ -0.16
CLDN20P56880 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CLDN20P56880 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN20P56880 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.03□□□□□ -0.16
CLDN20P56880 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN20P56880 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.03□□□□□ -0.16
CLDN20P56880 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN20P56880 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN20P56880 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN20P56880 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN20P56880 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN20P56880 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.03□□□□□ -0.16
CLDN20P56880 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN20P56880 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN20P56880 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC14.03□□□□□ -0.16
CLDN20P56880 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN20P56880 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC14.03□□□□□ -0.16
CLDN20P56880 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
CLDN20P56880 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC14.03□□□□□ -0.16
CLDN20P56880 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN20P56880 AP006294.1-201ENST00000415407 339 ntBASIC14.03□□□□□ -0.16
CLDN20P56880 PTPA-220ENST00000436883 532 ntTSL 4 BASIC14.03□□□□□ -0.16
CLDN20P56880 RBM7-207ENST00000544582 692 ntTSL 3 BASIC14.03□□□□□ -0.16
CLDN20P56880 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.03□□□□□ -0.16
CLDN20P56880 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN20P56880 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC14.03□□□□□ -0.16
CLDN20P56880 WFDC1-204ENST00000613603 549 ntBASIC14.03□□□□□ -0.16
CLDN20P56880 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN20P56880 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN20P56880 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN20P56880 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN20P56880 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN20P56880 OR2I1P-210ENST00000642037 4691 ntBASIC14.03□□□□□ -0.16
CLDN20P56880 MROH4P-201ENST00000431302 1578 ntBASIC14.03□□□□□ -0.16
CLDN20P56880 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN20P56880 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.03□□□□□ -0.16
CLDN20P56880 AC105250.1-201ENST00000509378 2057 ntBASIC14.03□□□□□ -0.16
CLDN20P56880 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.03□□□□□ -0.16
CLDN20P56880 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN20P56880 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN20P56880 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN20P56880 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.03□□□□□ -0.16
CLDN20P56880 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN20P56880 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN20P56880 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN20P56880 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN20P56880 AC007686.3-201ENST00000619017 3487 ntBASIC14.03□□□□□ -0.16
CLDN20P56880 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN20P56880 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN20P56880 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN20P56880 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.03□□□□□ -0.16
CLDN20P56880 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
CLDN20P56880 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CLDN20P56880 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
CLDN20P56880 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CLDN20P56880 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.02□□□□□ -0.16
CLDN20P56880 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CLDN20P56880 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CLDN20P56880 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.02□□□□□ -0.16
CLDN20P56880 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CLDN20P56880 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CLDN20P56880 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.02□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms