Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
AP1S2P56377 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
AP1S2P56377 MIR661-201ENST00000384842 89 ntBASIC14.87□□□□□ -0.03
AP1S2P56377 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
AP1S2P56377 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.87□□□□□ -0.03
AP1S2P56377 MYCLP2-201ENST00000449268 967 ntBASIC14.87□□□□□ -0.03
AP1S2P56377 OARD1-208ENST00000469104 704 ntTSL 2 BASIC14.87□□□□□ -0.03
AP1S2P56377 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
AP1S2P56377 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC14.87□□□□□ -0.03
AP1S2P56377 API5-211ENST00000534695 560 ntTSL 5 BASIC14.87□□□□□ -0.03
AP1S2P56377 MIR4745-201ENST00000577608 62 ntBASIC14.87□□□□□ -0.03
AP1S2P56377 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC14.87□□□□□ -0.03
AP1S2P56377 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC14.87□□□□□ -0.03
AP1S2P56377 AC133539.2-201ENST00000604757 467 ntBASIC14.87□□□□□ -0.03
AP1S2P56377 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC14.87□□□□□ -0.03
AP1S2P56377 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC14.87□□□□□ -0.03
AP1S2P56377 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.87□□□□□ -0.03
AP1S2P56377 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
AP1S2P56377 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
AP1S2P56377 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
AP1S2P56377 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.87□□□□□ -0.03
AP1S2P56377 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.87□□□□□ -0.03
AP1S2P56377 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
AP1S2P56377 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
AP1S2P56377 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
AP1S2P56377 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.87□□□□□ -0.03
AP1S2P56377 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
AP1S2P56377 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
AP1S2P56377 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
AP1S2P56377 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
AP1S2P56377 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
AP1S2P56377 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC14.87□□□□□ -0.03
AP1S2P56377 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
AP1S2P56377 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
AP1S2P56377 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
AP1S2P56377 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
AP1S2P56377 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.86□□□□□ -0.03
AP1S2P56377 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
AP1S2P56377 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
AP1S2P56377 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.86□□□□□ -0.03
AP1S2P56377 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.86□□□□□ -0.03
AP1S2P56377 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.86□□□□□ -0.03
AP1S2P56377 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
AP1S2P56377 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.86□□□□□ -0.03
AP1S2P56377 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
AP1S2P56377 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.86□□□□□ -0.03
AP1S2P56377 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.86□□□□□ -0.03
AP1S2P56377 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
AP1S2P56377 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
AP1S2P56377 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
AP1S2P56377 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
AP1S2P56377 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
AP1S2P56377 CICP23-201ENST00000605013 2741 ntBASIC14.86□□□□□ -0.03
AP1S2P56377 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
AP1S2P56377 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
AP1S2P56377 AC236430.1-201ENST00000402231 743 ntBASIC14.86□□□□□ -0.03
AP1S2P56377 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC14.86□□□□□ -0.03
AP1S2P56377 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
AP1S2P56377 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
AP1S2P56377 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.86□□□□□ -0.03
AP1S2P56377 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC14.86□□□□□ -0.03
AP1S2P56377 ENPP7P5-201ENST00000541031 1031 ntBASIC14.86□□□□□ -0.03
AP1S2P56377 CDK4-206ENST00000549606 558 ntTSL 2 BASIC14.86□□□□□ -0.03
AP1S2P56377 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC14.86□□□□□ -0.03
AP1S2P56377 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC14.86□□□□□ -0.03
AP1S2P56377 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC14.86□□□□□ -0.03
AP1S2P56377 AL359711.2-201ENST00000563105 872 ntBASIC14.86□□□□□ -0.03
AP1S2P56377 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC14.86□□□□□ -0.03
AP1S2P56377 YTHDF3-AS1-201ENST00000603538 718 ntBASIC14.86□□□□□ -0.03
AP1S2P56377 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.86□□□□□ -0.03
AP1S2P56377 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
AP1S2P56377 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.86□□□□□ -0.03
AP1S2P56377 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
AP1S2P56377 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
AP1S2P56377 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.86□□□□□ -0.03
AP1S2P56377 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.86□□□□□ -0.03
AP1S2P56377 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
AP1S2P56377 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
AP1S2P56377 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.86□□□□□ -0.03
AP1S2P56377 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
AP1S2P56377 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
AP1S2P56377 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
AP1S2P56377 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
AP1S2P56377 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
AP1S2P56377 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
AP1S2P56377 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
AP1S2P56377 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
AP1S2P56377 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP1S2P56377 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP1S2P56377 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP1S2P56377 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.85□□□□□ -0.03
AP1S2P56377 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP1S2P56377 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP1S2P56377 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP1S2P56377 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP1S2P56377 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.85□□□□□ -0.03
AP1S2P56377 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP1S2P56377 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP1S2P56377 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP1S2P56377 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms